Pairwise Alignments

Query, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

Subject, 323 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  102 bits (255), Expect = 1e-26
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 37/312 (11%)

Query: 37  DRKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKEPVIPAGANKAVFLLAPLVAVTLAL 96
           DR+V+A +Q R G        L Q F D+LK + K  ++P  AN  VFL+ PL+ +    
Sbjct: 35  DRRVFARLQRRVGAP------LLQPFYDVLKLMTKRTLVPENANLVVFLMVPLLGLASMG 88

Query: 97  ATYAVIPFADGWVVANINVGILYIFAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVS 156
              A+IP    +  +     +L +F + S+    +++ G AS S +  +G  R  A M++
Sbjct: 89  VAAAMIPIPGLYDPSPAFGDLLVLFYLLSVPAVMLMLAGSASGSPFGGIGFSREMAIMLA 148

Query: 157 YEVSIGLVIVTVLLCVGS-------LNLTDIVLAQRTGLGTMMGLPASFLDWHWLSLFPM 209
           YE  I LVIV+V L  G+       L+L++IV  Q+     +      F  W W ++   
Sbjct: 149 YEGPILLVIVSVALKTGAALGQPICLSLSEIVRYQQAHGAYL------FDPWMWPAVL-T 201

Query: 210 FIVFFISGLAETNRPPFDLPEAESELVAGHMVEYGSTPYMMFMLGEYAAIVLICCLTTIL 269
           +I F  + L  +   PFD+PEAESE++ G ++EY      +  L      V++  L  +L
Sbjct: 202 YIAFIPANLGIS---PFDIPEAESEVLEGPLIEYSGVALGLLKLTSAVKSVVVIGLGIVL 258

Query: 270 FLGGWLPIVDVWFLNWVPGIVWFALKGCMVFFM--IALTKAFVPRYRYDQ--LMRLGWKV 325
           F               + G+V FALK C+V  +  +++ +A V R R DQ  +  L W  
Sbjct: 259 FFPNG--------PEGLFGLVVFALK-CLVITVCGVSVLRAAVGRMRIDQAVIFYLKWPE 309

Query: 326 FLPL-SLAMVVI 336
            L + SLA+V +
Sbjct: 310 LLGIASLALVAM 321