Pairwise Alignments

Query, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

Subject, 300 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 96.3 bits (238), Expect = 9e-25
 Identities = 88/310 (28%), Positives = 151/310 (48%), Gaps = 37/310 (11%)

Query: 19  SLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKEPVIPAG 78
           ++LL+VC    +  +L   R+V A +  R+GP ++      Q++ DL K ++KE     G
Sbjct: 10  NVLLVVCAAPLLDGVL---RQVKARIHSRQGPPIL------QTYFDLAKLLVKED--QRG 58

Query: 79  ANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYIFAISSLEVYGIIMGGWAS 138
            N+ +F  AP+V +   + +   +P A    +      I++++ ++   +  + +GG AS
Sbjct: 59  VNQLLFAWAPVVCMASVILSALFVPMAGLSPLGFSGDAIVFLYVLTMAPLC-MCLGGMAS 117

Query: 139 NSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCVGSLNLTDIVLAQRTGLGTMMGLPASF 198
            S Y + GA R    +++ E  + + ++T  +   SLNL D V A   G       PA  
Sbjct: 118 GSPYAYAGANREIMTLMAVEPVVAICLITSGIRAHSLNLADCVNAYAAGA------PA-- 169

Query: 199 LDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHMVEYGSTPYMMFMLGEYA- 257
                LS+    I FF+   AE ++ PFD  EAE+E++ G ++EY      +F    YA 
Sbjct: 170 -----LSMIIATIAFFLILPAELSKVPFDQAEAETEIMEGPLIEYSGRKLALFKWSFYAK 224

Query: 258 AIVLICCLTTILFLGGWLPIVDVW-FLNWVP-GIVWFALKGCMVFFMIALTKAFVPRYRY 315
            IVLI      LF+  +LP    W  +N+VP  I+   +K  +V  +I +     PR++ 
Sbjct: 225 QIVLI-----TLFVEWFLP----WPHMNFVPLDILATLIKVVIVAVIIEVIAQIFPRFKI 275

Query: 316 DQLMRLGWKV 325
            Q +R  + V
Sbjct: 276 HQSIRYFYAV 285