Pairwise Alignments

Query, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

Subject, 332 a.a., respiratory-chain NADH dehydrogenase subunit 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  114 bits (285), Expect = 4e-30
 Identities = 100/319 (31%), Positives = 152/319 (47%), Gaps = 42/319 (13%)

Query: 32  FLLLADRKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKEPVIPAGANKAVFLLAPLVA 91
           FL   DR++ A +Q R GP ++ P+       D+ K   KE V+PA AN+A FLLAPL+ 
Sbjct: 37  FLKGLDRRIEARLQRRVGPPLIQPY------LDIAKLFTKETVMPASANRAAFLLAPLLG 90

Query: 92  VT--LALATYAVIPFADGWVVANINVGILYIFAISSLEVYGIIMGGWASNSKYPFLGALR 149
           +T     A    +P   G + A  +  +L IF +  L    +++GG AS+S +  +G  R
Sbjct: 91  LTGMAVCAALLPVPGVSGGLPAMGD--LLVIFYLLPLPAIALMVGGSASSSPFGAMGFSR 148

Query: 150 SAAQMVSYEVSIGLVIVTVLLCVGSLNLTDIVLAQRTGLGTMMGLPASFLDWH----WLS 205
               M +YE+ +  V++ V + VG            TG G    L A+ +D+      L+
Sbjct: 149 EMTLMFAYEMPLLAVMLAVAMKVG----------MATGGGAEFSL-ANIVDYQLANGQLA 197

Query: 206 LFPMFI------VFFISGLAETNRPPFDLPEAESELVAGHMVEYGSTPYMMFMLGEYAAI 259
           L P+ I      + F+ G   T   PFD+PEAE+E++ G ++EY       F +      
Sbjct: 198 LDPVMIPALLAYLLFLPGTMGT--VPFDVPEAETEIIEGPLLEYSGPALAFFHIASALKT 255

Query: 260 VLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVFFMIALT--KAFVPRYRYDQ 317
           V++  L   LFL G +P         V  I WF LK C     ++LT  K+   R+R DQ
Sbjct: 256 VVVLGLGVALFLPGTVP------GGIVANIPWFVLK-CAALMAVSLTLVKSATGRFRVDQ 308

Query: 318 LMRLGWKVFLPLSLAMVVI 336
                 K    L+LA +V+
Sbjct: 309 AFTFYLKYPSVLALASLVL 327