Pairwise Alignments

Query, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

Subject, 331 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

 Score = 53.5 bits (127), Expect = 7e-12
 Identities = 64/295 (21%), Positives = 131/295 (44%), Gaps = 35/295 (11%)

Query: 38  RKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKEPVIPAGANKAVFLLAPLVAVTLALA 97
           RK+ A +Q R+GP++  P      F  + K++ KE   P      +F   PL++  +   
Sbjct: 36  RKIQARIQQRKGPSISSP-----GFWAIFKYLYKEAKEPVSDLPKLFKFMPLLSFIIVWM 90

Query: 98  TYAVIPFADGWVVANINVGILYIFAISSLEVYGIIMGGWASNS---KYPFLGALRSAAQM 154
             A+       +++N  +GI+ +  I  +    IIMG  AS     + PF+   + +  +
Sbjct: 91  VLALTTVVHFHILSN-EIGIIGLLKIEEMSY--IIMGSLASTVMGIRMPFIDECKGSGYL 147

Query: 155 VSYEVSIG---LVIVTVLLCVGSL-----NLTDIVLAQRTGLGTMMGLPASFLDWHWLSL 206
            + ++++G    V    ++ VGS       L   +  +   L  ++G   SFL     +L
Sbjct: 148 KTIKITLGQLSAVRAFKMITVGSFPFYLATLLPFIPHKSIFLNNLIG--NSFL----FTL 201

Query: 207 FPMF--IVFFISGLAETNRPPFDLPEAESELVAGHMVEYGSTPYMMFMLGEYAAIVLICC 264
             +F  + + I  +  T   PF +   +++++ G  +EY       ++  +   ++ +  
Sbjct: 202 GGLFGALAYIIGYIIMTKDYPFSIMHTKADVIEGPTMEYSGKYRAFYLSVKELLMITLGS 261

Query: 265 LTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVFFMI-ALTKAFVPRYRYDQL 318
           L   L+LG     +    LN +  ++ FA+   +VF +I A+  A+ P + + Q+
Sbjct: 262 LFATLYLG-----IAPDILNPITIVMNFAV--ALVFPIISAVVSAYTPVFTFRQV 309