Pairwise Alignments

Query, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

Subject, 345 a.a., NADH dehydrogenase (quinone) (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  411 bits (1056), Expect = e-119
 Identities = 207/348 (59%), Positives = 257/348 (73%), Gaps = 12/348 (3%)

Query: 1   MEQFFWSYVWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQ 60
           M  FF +    A++++ Q L +L  ++V++ FL+  DRK+WAAVQ+RRGPNVVG FGL Q
Sbjct: 1   MADFFSTGPGIAVLIIAQCLAVLGFVMVSLLFLVYGDRKIWAAVQMRRGPNVVGAFGLLQ 60

Query: 61  SFADLLKFILKEPVIPAGANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYI 120
           + AD LK+++KE V+PAGA+K VF+LAP+ +  LA+  +AVIPF DGWV+A+INV ILY+
Sbjct: 61  TVADALKYVVKEVVVPAGADKPVFMLAPMTSFVLAMIAWAVIPFNDGWVLADINVAILYV 120

Query: 121 FAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCVGSLNLTDI 180
           FA+SSLEVYG+IMGGWASNSKYPFLG+LRSAAQM+SYEVSIGL+I+ V+L  GS+N + I
Sbjct: 121 FAVSSLEVYGVIMGGWASNSKYPFLGSLRSAAQMISYEVSIGLIIIGVILSTGSMNFSAI 180

Query: 181 VLAQRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHM 240
           V AQ    G        F  W+WL   PM  +FFIS LAETNRPPFDLPEAESELVAG+ 
Sbjct: 181 VAAQDGDFG--------FFSWYWLPHLPMVFLFFISALAETNRPPFDLPEAESELVAGYQ 232

Query: 241 VEYGSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVF 300
           VEY STP+++FM GEY AI L+C L T+LF GGWL  +   FL    G +W   K    F
Sbjct: 233 VEYSSTPFLLFMAGEYIAIFLMCALITLLFFGGWLSPIP--FL--PDGPIWMVGKMAFFF 288

Query: 301 FMIALTKAFVPRYRYDQLMRLGWKVFLPLSLAMVVIVAFVLKLTGWAG 348
           F+ A+ KA VPRYRYDQLMRLGWKVFLP SLA VV VAF  +   + G
Sbjct: 289 FLFAMVKAIVPRYRYDQLMRLGWKVFLPFSLAWVVFVAFAAQFELFGG 336