Pairwise Alignments

Query, 434 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 451 a.a., NADH dehydrogenase from Pseudomonas fluorescens FW300-N2E3

 Score =  308 bits (789), Expect = 2e-88
 Identities = 167/394 (42%), Positives = 234/394 (59%), Gaps = 6/394 (1%)

Query: 27  GHWDGTKQIIEKGRDWIINEMKASGLRGRGGAGFPTGLKWSFMPKENDGRPHYLVVNADE 86
           G+    K   +  +D I+  +K SGL+GRGGAGFPTG+KW  MPK+      YL+ NADE
Sbjct: 42  GYAAARKAFADMSQDDIVQTVKDSGLKGRGGAGFPTGVKWGLMPKDESMNIRYLLCNADE 101

Query: 87  SEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTAYIYVRGEYMREREALQAAIDECYDA 146
            EP T KDR ++   PH LIEG +I+  A+  +  YI++RGEY    + L  A++E   A
Sbjct: 102 MEPNTWKDRMLMEQLPHLLIEGMLISARALKTYRGYIFLRGEYTTAAKHLNRAVEEAKAA 161

Query: 147 GLLGKN-NKNGWDYDIYVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANMGLYGCP 205
           GLLGKN   +G+D++++VH GAG YICGEETAL+ SLEG++  PR KPPFPA +G++G P
Sbjct: 162 GLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAAVGVWGKP 221

Query: 206 TTVNNVESIAVAPTILRRGASWFSSIGRPNNV--GTKLFMVSGHVERPCTFEDALGLSFR 263
           T VNNVE++   P I+  G  W+ S+ R  +   GTKL   SG V+ P  +E   G+  R
Sbjct: 222 TCVNNVETLCNVPAIIGDGVDWYKSLAREGSEDHGTKLMGFSGKVKNPGLWELPFGVPAR 281

Query: 264 ELIEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKDAIMDFDGMREVKSSFGTGGMIVM 323
           EL E + GG+R G+  L    PGGA    +  E + DA M   G+ +V +  GTG  + +
Sbjct: 282 ELFEDYAGGMRDGY-KLKCWQPGGAGTGFLLPEHL-DAQMYAGGIAKVGTRMGTGLAMAV 339

Query: 324 DKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMWRVLERMVKGNAQKREIDMLFEVTK 383
           D S +++  +  +  FF  ESCG CTPCR+G  W  ++L  +  G  Q  +I+ L  +  
Sbjct: 340 DDSVNMVSLLRNMEEFFARESCGFCTPCRDGLPWSVKLLRAIENGEGQAGDIETLLGLVG 399

Query: 384 QI-EGHTICALGDAAAWPVQALIRNFRPEIEKRI 416
            +  G T CA    A  P+ + I+ FRPE E  I
Sbjct: 400 FLGPGKTFCAHAPGAVEPLGSAIKYFRPEFEAGI 433