Pairwise Alignments

Query, 369 a.a., NADH ubiquinone oxidoreductase chain E from Agrobacterium fabrum C58

Subject, 402 a.a., NADH-quinone oxidoreductase, E subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  291 bits (746), Expect = 2e-83
 Identities = 179/404 (44%), Positives = 219/404 (54%), Gaps = 59/404 (14%)

Query: 3   VRRLAEDQFQPVAFAFNADNTAWAEKTIQKYPAGRQQSAVIPLLMRAQEQDGWVTRAAIE 62
           +RRL  +Q  P  FAF  +N AWA   + K+P GRQ SA+IP+L RAQEQ+GW+++ AIE
Sbjct: 2   LRRLHAEQ--PADFAFTPENEAWALTQMTKFPEGRQASAIIPILWRAQEQEGWLSKPAIE 59

Query: 63  KVADMLDMAYIRVLEVATFYTQFQLKPVGTRAHVQVCGTTPCMLRGSEALMDVCRKKIHH 122
            VADMLDM YIR LEVATFY  FQL+PVG+ AH+Q+CGTT CM+ G+E L+ VC++KI  
Sbjct: 60  YVADMLDMPYIRALEVATFYFMFQLQPVGSVAHIQICGTTSCMICGAEDLVAVCKEKIAP 119

Query: 123 DPLHTNDSGTLSWEEVECQGACVNAPMVIIFKDAYEDLTPERLEEIIDTFEAGKGDTVKT 182
                +  G  SWEEVEC G+C NAPM  I KD YEDLT E    ++D   A  G+    
Sbjct: 120 RAHQLSADGKFSWEEVECLGSCANAPMAQIGKDYYEDLTVESFSALLDRMAA--GEVPVP 177

Query: 183 GPQIDRHESVPVGGLTTLTE-EIKPDRSN------------------------------- 210
           GPQ  R+ S P GGLT+LTE E   D  N                               
Sbjct: 178 GPQNGRYTSEPAGGLTSLTEYEAGKDPYNASARLAVDLGDTLKRIDGSEVPLTAPWLGKD 237

Query: 211 --LDKPA-----------EPPAEAAPVPPSNAAKPKTDAPETDPKLKTPVTEPKAAAENA 257
             L KPA              AEAAP P    A    +AP+  P   T V   +A     
Sbjct: 238 AALPKPANRQDAPVAEAKSVAAEAAPDPAVAPAATPAEAPKVTP---TAVLPGQAELATR 294

Query: 258 KAGEKESAGKEAVASKPSLESADRPAGIDKPATPDDLKLISGVGPKIEGTLNGLGIFTYA 317
           K   K  A      +KP +  + R  G       DDLK I GVGPK+E  LN +GI+ + 
Sbjct: 295 KGNWKYGAAAPQQGAKPKMLESARAGG------ADDLKKIKGVGPKLETLLNSMGIYHFD 348

Query: 318 QIAAWKQAECDWVDGYL-NFKGRIGRDDWVKQAEALAKGGEAEY 360
           QIAAW  AE  WVD  L  FKGR  RD+WV QA+ LA GGE E+
Sbjct: 349 QIAAWSDAELAWVDENLEGFKGRASRDEWVAQAKTLASGGETEF 392