Pairwise Alignments

Query, 278 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 300 a.a., Membrane transporters of cations and cationic drugs from Phaeobacter inhibens DSM 17395

 Score =  108 bits (270), Expect = 1e-28
 Identities = 83/282 (29%), Positives = 128/282 (45%), Gaps = 10/282 (3%)

Query: 6   LLLVLLGAVLHAGWNALVKSGSDKSLDASLIAAGAAACSLPFLPFL-PFPAPVAIPFLIA 64
           L+L +L AVLHA + AL K   D  L    I       ++P   F+ P+P P   P   A
Sbjct: 19  LVLAVLAAVLHAVFGALQKGRYDPWLSRGAIDFSYGMMAMPLALFVVPWPEPHMWPIFAA 78

Query: 65  SAVLQFAYFRLVAAAYTIGDIGLVYPVMRGVAPLIVAATSSLFLSEVLSPLALAGIAVIS 124
              +   Y  L   AY+ G   +VYPV+RG  PL     +++   E  + +   G+AV+ 
Sbjct: 79  VWGIHVLYKILQGLAYSKGSYTVVYPVVRGTGPLFTVIGATVLFDERFTAIQWLGVAVLL 138

Query: 125 GGILTLAF-------EARRGGGKAILVALLNAFVIASYTFVDGVGARLSGNAISYTLWMS 177
            GI  LA          R   G A+ +A++    +A YT  D  G R + +  ++  W  
Sbjct: 139 AGIFGLALYNFRNLTSNRETLGSALALAVVTGVFVALYTTYDAYGIRATADPFTFLAWFF 198

Query: 178 LLPPVLLFGFAFYQRGVGPVARHVQRNWW-RGLIGGGGSILSYGLALYAMTKAPVAVVAA 236
            +  + +  +A Y R    V R        +GL+GG  +  S+G  + A     V   A 
Sbjct: 199 FIDGLAMPPYA-YMRWRAMVPRPDPGPLMAKGLLGGVIAFGSFGAVMLATRLDKVGEAAV 257

Query: 237 LRETSILFALVISVVILKERASIWRYLAGGIIAAGVLVMRLG 278
           LRETS +FA +I  ++LKE     R     +IA G +++ +G
Sbjct: 258 LRETSTVFAALIGWLVLKETVGPRRIALMALIALGAVIVEMG 299