Pairwise Alignments

Query, 421 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 569 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score =  103 bits (257), Expect = 1e-26
 Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 30/292 (10%)

Query: 148 IAIILFYEKLGRYLQRHIVLRFAICGVVILSF----DQAGFYGALRLLFNAPV---DVFY 200
           IA++  Y  L   +   ++++ A+   VI++F    D       LRL F +       F+
Sbjct: 271 IAMVAGYSDLA-IISAALLMKLAVFYYVIVAFSLKKDLFPTRNMLRLFFLSMAVANGAFW 329

Query: 201 DGWKA-----KMAAVGIYSLLFATYL------WLTAAKGRFLTRRS------VADVFNDL 243
            G +       M+ +G+ SL+   ++      WL   + ++  R +      +   +   
Sbjct: 330 AGARLVDDVRAMSLIGVQSLIVDGFVVGVFFAWLVHGRSQYGRRETERQLHMIRQAYEVE 389

Query: 244 TFRERYEELLSRSGRDMLTGVSDRARMELDAPSLVVECLEKRRPVSVLIVDIDHFKTVND 303
             R+R  E  +R+  D LTG+ +R      A   +   L  +RP ++L++D+DHFK VND
Sbjct: 390 QERKRQAEWEART--DFLTGLLNRRSFVDLAERELARSLRYQRPFTLLMIDVDHFKAVND 447

Query: 304 TFGHLQGDEILREFAAVLKRAVQPLGHLYRFGGEEFVALLPAMTHETALAFSASL-RVAV 362
           T GHL GD +L+  A  +K  ++ +    R GGEEF A++       AL  +  L  V  
Sbjct: 448 TRGHLVGDVVLQNVARRIKETLRLIDIFGRTGGEEFAAVIVETGGPEALEIARRLCAVVA 507

Query: 363 LAELQRPDGSPLTVSIGVATAFEDGQ--LFRALLSEADAWLYAAKNNGRDQV 412
             E+ +P+G P+ V+I +     +G+   F AL++EAD  LYAAK  GR+QV
Sbjct: 508 RDEIVQPEGEPIGVTISIGLTRSNGRSISFSALMNEADQALYAAKRAGRNQV 559