Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (334), Expect = 2e-35
 Identities = 127/474 (26%), Positives = 228/474 (48%), Gaps = 34/474 (7%)

Query: 39  QMASDDSTLGMRVGCYEGLVRIGFDMRLEASLAESWKQTEPK-VWEFKLRKGVKFQNGED 97
           Q  + D  L  R+   E LV I  + +    LA+SW  ++   VW F++R  V+F +G  
Sbjct: 52  QDLAKDGFLFSRLQVVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQ 111

Query: 98  FNAAAAVNALTLLL-KASVPARAFSPKQIAGVEAVGDDVV-KVTTIEPSVLLPAQLASPA 155
             A AA  AL   L K  V  +      I  + A  D VV ++ T+     L A LA  +
Sbjct: 112 LTAQAAATALNHALGKPGVIKQV----PIKAITAQNDQVVIELNTVYRP--LAAVLAHYS 165

Query: 156 TAILAPSAYKDGKINPIGTC-TGPFEITEVD-PNQYMVMKANHGYWGGMPKLDGGRVNFV 213
            AI +PS+Y D   N I    TGP++I ++  P++  V++ N  YWG    ++   +N++
Sbjct: 166 LAIASPSSY-DASGNVIRLLGTGPYQIAQLQAPHKASVIRFN-AYWGKPASIE--TINYL 221

Query: 214 PD--ADTRATQIRTGEVQISRLVPPWSIKTIESTKGVKVAAISVPRITELLLNNSRPPFK 271
               +++RA   +TG+  +   + P SI +++ +  + +   S+PR   + LNN  P   
Sbjct: 222 AGHRSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLN 281

Query: 272 DKKVREAVRAAIDAAGIASSIYEEKVKSASMPFAP--GQPWAAEEPTSTYDVAKAKSLLK 329
              VR+A+  AI+  GIA S+ +     A   F+P  G    A++      +A A++LL 
Sbjct: 282 HADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLA 341

Query: 330 EAGIAPG----------SLKVTILAYTMKTELKDVAAIIQAQLEEIGIKVDVRVAEYSAI 379
             G              + +V +L Y  + EL  +A  +QAQL+EIGI+VD+ +   SAI
Sbjct: 342 NQGWTLNDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAI 401

Query: 380 EPDLLAGNFDMVLLSRGYATDVIEPAGYLNADYSC--TGTYNISHYCNEETDKLIKAAYA 437
                 G  +M L++R + T + +P   L +D++      +  +++ + +  +L+     
Sbjct: 402 PAKHHDGTLEMALIARNFGT-IADPLPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELST 460

Query: 438 EVEPAKRYAIYGQIAKKIYDDAVSVFLVHETVFDAYSEKLE--NFRPHPINYFV 489
           E + A+   +  Q ++ + D+   + + +     + ++++   +F P  INY V
Sbjct: 461 ESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDPFEINYRV 514