Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 520 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  134 bits (338), Expect = 6e-36
 Identities = 128/477 (26%), Positives = 202/477 (42%), Gaps = 42/477 (8%)

Query: 43  DDSTLGMRVGCYEGLVRIGFDMRLEASLAESWKQTEPKVWEFKLRKGVKFQNGEDFNAAA 102
           D  TL      YEGLVR   ++++E +LAESW+     VW F LRKGVKF +G +F A  
Sbjct: 42  DSYTLSFLNHVYEGLVRYDANLKIEPALAESWETVSDTVWRFHLRKGVKFHDGAEFTADD 101

Query: 103 AVNALTLL------LKASVPARAFSPK---QIAGVEAVG------DDVVKVTTIEPSVLL 147
            + +L  +      L+ ++PA   S K       +E  G      +D+  +   +   L 
Sbjct: 102 VLASLKRVSDPVSPLRGNLPAYKSSKKVDDHTIDIELSGPYPLLLNDLTNIHVFDAGWLK 161

Query: 148 PAQLASPATAILAPSAYKDGKINPIGTCTGPFEITEVDPNQYMVMKANHGYWGGMPKLDG 207
                 P         Y     N     TGPF++    P+   V+  N  +W    K + 
Sbjct: 162 TNNSEKPTDVGAKIEGYATYHTNG----TGPFKLESRVPDSKTVLVKNPDWWDKTSKSNV 217

Query: 208 GRVNFVP--DADTRATQIRTGEVQISRLVPPWSIKTIESTKGVKVAAISVPRITEL---- 261
            R+ F P   A TR   + +GEV  +   P   +  +++   +KV   +  R   +    
Sbjct: 218 DRIEFTPITSAATRVAALLSGEVNFTENAPSQDLPRLQAQPDLKVMERTDLRTVMVGFNR 277

Query: 262 ---LLNNSRPPFKDKKVREAVRAAIDAAGIASSIYEEKVKSASMPFAPGQPWAAEE--PT 316
              L N S   F D +VR+A   A+D   I   +   K ++A    AP  P  A E   T
Sbjct: 278 KPELANGSENKFNDLRVRQAFAHALDRDLIQQRVMRGKSRTAGAVVAPEIPGYAPELDTT 337

Query: 317 STYDVAKAKSLLKEAGIA--PGSLKVTILAYTMKTELKDVAAIIQAQLEEIGIKVDVRVA 374
             +D A +K LL EAG +  P +L  T  AY  + EL      +   L   G K  + +A
Sbjct: 338 LAFDPALSKKLLAEAGASDYPFTLVCTTDAYVNEEELCQGLVNL---LSRAGFKPQLDIA 394

Query: 375 EYSAIEPDLLAGNFDMVLLSRGYATDVIEPA-----GYLNADYSCTGTYNISHYCNEETD 429
             +A  P   +G  D+ L+  G+AT+ +  +       +    +  G +N   +   E D
Sbjct: 395 PTAAQAPKRTSGKSDVYLI--GWATEPMLDSYSILLQMIQTKTANAGVFNWGGWSYPEID 452

Query: 430 KLIKAAYAEVEPAKRYAIYGQIAKKIYDDAVSVFLVHETVFDAYSEKLENFRPHPIN 486
           KLI  A  E++  KR A+  +  + + D+ V + L  + +    S K++     P N
Sbjct: 453 KLIVQASTEMDRTKRLALQSKALQMVKDEIVMLPLHQQPMAWVMSNKIDKIVQLPDN 509