Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  160 bits (406), Expect = 8e-44
 Identities = 129/441 (29%), Positives = 212/441 (48%), Gaps = 33/441 (7%)

Query: 51  VGCYEGLVRI-GFDMRLEASLAESWKQTEP-KVWEFKLRKGVKFQNGEDFNAAAAVNALT 108
           V  Y+GLVR     + +E +LAESWK ++  K + F LR+GVKF +G +F+A A      
Sbjct: 59  VNVYDGLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFD 118

Query: 109 LLLKASVP-------ARAFSPKQIAGVEAVGDDVVKVTTIEPSVLLPAQLASPATAILAP 161
            +LK   P         +F+   +  V  + +  V+    E      + LA P   I++P
Sbjct: 119 RMLKKDHPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSP 178

Query: 162 SAY-KDGKI---NPIGTCTGPFEITEVDPNQYMVMKANHGYWGGMPKLDGGRVNFVPDAD 217
            A  K GK    +P GT  GPF+  E   NQ +V++ N  YW    KL       + DA+
Sbjct: 179 VAVEKHGKEYGRSPSGT--GPFKFVEWLSNQRVVVERNPDYWDSAAKLQAVVFRPITDAN 236

Query: 218 TRATQIRTGEVQISRLVPPWSIKTIESTKGVKVAAISVPRITELLLNNSRPPFKDKKVRE 277
           TR  ++  G + +   VPP ++ T E      VA  + P +   +LN  + PF DK+VR+
Sbjct: 237 TRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTKQGPFADKRVRQ 296

Query: 278 AVRAAIDAAGIASSIYEEKVKSASMPFAPGQPW--AAEEPTSTYDVAKAKSLLKEAGIAP 335
           A   A++   +   +       A+ P  P   W  ++ EP + +D  KAK+LL EAG+  
Sbjct: 297 AANYAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYA-HDPEKAKALLAEAGVE- 354

Query: 336 GSLKVTILAYTMKTELKD---VAAIIQAQLEEIGIKVDVRVAEYSA----IEPDLLAGNF 388
            + +VT       + + D   + A IQA L+ +G KV +   E++     + P  L G  
Sbjct: 355 -NPQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPG-LEGKA 412

Query: 389 DMVLLSRGYATDVIEPAGYLNADYSC---TGTYNISHYCNEETDKLIKAAYAEVEPAKRY 445
           DM  ++  + T+  +   YL          G +N  +Y N + D+L++ A    + A+R 
Sbjct: 413 DMAEMA--WMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARRSTDQAERG 470

Query: 446 AIYGQIAKKIYDDAVSVFLVH 466
            +YG++   ++DDA  +F+ +
Sbjct: 471 KLYGEVQSIVHDDAPWLFVAN 491