Pairwise Alignments

Query, 355 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  235 bits (599), Expect = 1e-66
 Identities = 134/321 (41%), Positives = 188/321 (58%), Gaps = 8/321 (2%)

Query: 20  LLEIEDLHVSVPTPNGRKFVISGLTLSVNAGEVVALVGESGSGKSMTALSLMRLLPQGVE 79
           LL+++DL V   T +G    ++ L  S+  GE + +VGESGSGKS T  ++M LL +  +
Sbjct: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63

Query: 80  IDSGRISFAGRDILALSSSELDALRGADISMLFQQPQAMLDPTSRVRTQVAEPLWIHRKM 139
           I +G   F G++IL L   EL+ +R   I+M+FQ P   L+P  +V  Q+ E L +H+ M
Sbjct: 64  I-TGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122

Query: 140 SRSAALNRVVDLLSDVGIPDPSARAQCFAHELSGGMAQRVMIAAALSGNPQLLIADEPTT 199
            ++ A    V +L  V IP+   R   + HE SGGM QRVMIA AL   P+LLIADEPTT
Sbjct: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182

Query: 200 ALDVTVQAQILRLLDDERRKRRLATLLITHDLSVVAAFADRIAVMYAGRIVEEGPTQAIL 259
           ALDVTVQAQI+ LL++ +R+   A ++ITHDL VVA   D++ VMYAGR +E G    I 
Sbjct: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242

Query: 260 KAPQHPYTKALISCSLLTTDSEGQLL-TIPGSSAQAHDMSCGCRFHPRCALAKSAGMGGR 318
             P HPY + L+S ++   D+EG++L TIPG+      +  GC +  RC          R
Sbjct: 243 YNPSHPYAEGLLS-AIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTD-----R 296

Query: 319 CMATEPALNALPEGRKARCWA 339
           C    P L      R+  C++
Sbjct: 297 CKREAPILLPFGNSRQRACFS 317