Pairwise Alignments

Query, 355 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 560 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  250 bits (639), Expect = 6e-71
 Identities = 132/258 (51%), Positives = 172/258 (66%)

Query: 15  PERAPLLEIEDLHVSVPTPNGRKFVISGLTLSVNAGEVVALVGESGSGKSMTALSLMRLL 74
           P  +P L I+DL V++P    R F ++G++L+V A E+V LVGESGSGKSMTA ++MRLL
Sbjct: 7   PLASPRLIIDDLRVALPKSADRPFALNGISLTVGADEIVCLVGESGSGKSMTAGAIMRLL 66

Query: 75  PQGVEIDSGRISFAGRDILALSSSELDALRGADISMLFQQPQAMLDPTSRVRTQVAEPLW 134
                I  GRI   G D+L LS + + A+RGA + M+FQ+P   L+P   +  Q+AE   
Sbjct: 67  GPSTPITGGRILLEGVDLLGLSEAAMRAVRGARVGMIFQEPMTALNPLHTIGDQIAETFR 126

Query: 135 IHRKMSRSAALNRVVDLLSDVGIPDPSARAQCFAHELSGGMAQRVMIAAALSGNPQLLIA 194
            H  + R+    RV+DLL++V IPDP A A+ + HELSGG  QR MIA AL+  P LLIA
Sbjct: 127 THGTLGRAEIERRVLDLLAEVLIPDPVAAAKAYPHELSGGQRQRAMIAMALALEPALLIA 186

Query: 195 DEPTTALDVTVQAQILRLLDDERRKRRLATLLITHDLSVVAAFADRIAVMYAGRIVEEGP 254
           DEPTTALDVT QAQIL L+ D +R++    L +THD  VVA  ADR+AVM  G +VEEG 
Sbjct: 187 DEPTTALDVTTQAQILALIRDLQRRKGTGVLFVTHDFGVVAEIADRVAVMRGGEVVEEGA 246

Query: 255 TQAILKAPQHPYTKALIS 272
              +L  P HPYT+ALI+
Sbjct: 247 AAQVLNHPLHPYTRALIA 264



 Score =  150 bits (379), Expect = 8e-41
 Identities = 104/260 (40%), Positives = 142/260 (54%), Gaps = 14/260 (5%)

Query: 19  PLLEIEDLHVSVPTPN-----GR-KFVISGLTLSVNAGEVVALVGESGSGKSMTALSLMR 72
           PLL +E L  +  +       GR    +  ++ ++  G  + +VGESGSGKS  A  ++R
Sbjct: 281 PLLRVEGLSKTYRSGGFFGRGGRVTHAVKDVSFTLRRGATLGIVGESGSGKSTLARCVVR 340

Query: 73  LLPQGVEIDSGRISFAGRDILALSSSELDALRGADISMLFQQPQAMLDPTSRVRTQVAEP 132
           LL      +SG I     D+ AL+ ++        I M+FQ P   L+P  RV   VA+ 
Sbjct: 341 LLTS----ESGSIHLDDIDLSALTDNDWHR-ESRRIQMVFQDPYGSLNPRRRVGELVAQG 395

Query: 133 LWIHRKMSRSAALNRVVDLLSDVGIPDPSARAQCFAHELSGGMAQRVMIAAALSGNPQLL 192
             I R   R     RV +L + VG+ DP A    F HE SGG  QR+ +A AL+ +P +L
Sbjct: 396 P-IVRGAPRREVEARVRELFALVGL-DPKA-VDRFPHEFSGGQRQRIGLARALALDPDVL 452

Query: 193 IADEPTTALDVTVQAQILRLLDDERRKRRLATLLITHDLSVVAAFADRIAVMYAGRIVEE 252
           +ADE  +ALDV+VQAQ+L LL D R +  L+ L ITHDL V    AD I VM  G +VE 
Sbjct: 453 VADEAVSALDVSVQAQVLALLADLRERLNLSVLFITHDLRVAGQIADDILVMKDGAVVEA 512

Query: 253 GPTQAILKAPQHPYTKALIS 272
           GPT  +   P HPYTK L++
Sbjct: 513 GPTARVFADPHHPYTKTLMA 532