Pairwise Alignments

Query, 388 a.a., phage-related integrase from Agrobacterium fabrum C58

Subject, 311 a.a., site-specific tyrosine recombinase XerD from Sinorhizobium meliloti 1021

 Score = 63.9 bits (154), Expect = 6e-15
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 18/152 (11%)

Query: 196 TGMRQSEVLSLHFEDI-QNGRVTVWGVGATGQRTKSGKSRTVPLTA---RAQAVFDR--R 249
           TGMR SE++SL    + QNGR  +        R K  K R VPL+    RA   +    +
Sbjct: 153 TGMRVSELVSLPASVLAQNGRFLII-------RGKGNKERLVPLSQAAIRAMRAYGEALQ 205

Query: 250 REYTEGKAVFPSLSKNS--VAHYWGRLSEALNLESDKQFV---PHILRHEFCSRLASNGE 304
            E  +   +FPS  K+       + R  ++L   +  +     PH+LRH F S L +NG 
Sbjct: 206 EESADSPWLFPSNGKSGHLPRQVFARDLKSLAARAGIRVAAISPHVLRHAFASHLLANGA 265

Query: 305 NAAAIQKLAGHATLLVTQRYVHLFGDELDDVI 336
           +  A+Q+L GH+ +  TQ Y H+  + L D++
Sbjct: 266 DLRAVQELLGHSDISTTQIYTHVLEERLHDLV 297