Pairwise Alignments

Query, 750 a.a., topoisomerase IV subunit A from Agrobacterium fabrum C58

Subject, 908 a.a., DNA gyrase subunit GyrA from Phaeobacter inhibens DSM 17395

 Score =  411 bits (1056), Expect = e-119
 Identities = 244/603 (40%), Positives = 354/603 (58%), Gaps = 48/603 (7%)

Query: 18  VDLKAALEERYLAYALSTIMHRALPDVRDGLKPVHRRIIHAMSEMGIRPNSAFKKCARIV 77
           V +++ +   YL YA+S I+ RA+PD+RDGLKPVHRRI++AM E+G   +  ++K AR V
Sbjct: 16  VSIESEMRTSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHEVGNSHDKPYRKSARPV 75

Query: 78  GDVIGKFHPHGDQSVYDALVRLAQDFSQRYPIVDGQGNFGNIDGDGAAAYRYTEARMTDV 137
           GDV+GK+HPHGD ++YDALVR+AQDFS   P++DGQGNFG++DGD  AA RYTE RM   
Sbjct: 76  GDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGDNPAAMRYTEVRMDKP 135

Query: 138 AALLLEGIGEDAVDFRATYNEEDEEPVVLPGAFPNLLANGASGIAVGMATSIPPHNAHEL 197
           AA +L  I +D VDF+  Y+ +D EP VLP  FPN+L NGA GIAVGMAT+IPPHN  E+
Sbjct: 136 AASILADIEKDTVDFQDNYDGKDREPTVLPARFPNMLVNGAGGIAVGMATNIPPHNLGEV 195

Query: 198 CDAALHLIKHPDATVEKLVEFIPGPDLPTGGVIIESRENILDAYKTGRGGFRVRAKWETE 257
            DA L LI+ PD T E+L++++PGPD PTGGV++  R     AY  GRG   +RAK   E
Sbjct: 196 IDATLALIEDPDLTSEQLIDYVPGPDFPTGGVML-GRSGARKAYLEGRGSVVIRAKTRVE 254

Query: 258 DLGRGGYQIVITEIPFQVQKSRLIEKIAELLIARKLPLLEDVRDESAEDVRIVLVPKNRT 317
           ++ +  Y IV+ EIP+QV K+ +IEKIAE +  +K+  +  V+DES  +   V+V   R 
Sbjct: 255 EIRKDRYAIVVEEIPYQVNKAAMIEKIAEQVREKKIEGVSHVQDESDRNGVRVVVELKRD 314

Query: 318 VDATLLMESLFRLSDLESRLPLNMNVLSLGKVPKVMALNEVLSEWLAHRKDVLVRRSRHR 377
             A +++  L+R S +++    NM  L+ G+ P+ + L   L+ +L  R+DV+ RR+ + 
Sbjct: 315 ATAEVVLNQLYRFSPMQTHFGCNMLALNGGR-PEQLTLRRFLTSFLDFREDVIARRTAYD 373

Query: 378 LAAIDRRLEILGGLLIAYLNLDEVIRIIREEDEPKQ----VMMARW-------------- 419
           L     R  IL GL +A  N+DEV+  IR   +  +    +M  RW              
Sbjct: 374 LRKARERSHILCGLAVAVSNVDEVVATIRASADAAEARHKLMTRRWPAVDIAPYIRLIDD 433

Query: 420 -----------SLTDNQAEAILNMRLRNLRKLEEFEIRKEHDDLSKEKSEIEGLLASDDK 468
                      +L++ QA AIL +RL+ L ++   E+  E ++L+ +  E   +L+S ++
Sbjct: 434 PTHTMNDDGTYNLSEVQARAILELRLQRLTQIGVKEVTDELEELAGKIKEYLEILSSRER 493

Query: 469 QWQTVAWEIGEVKKKYAKATEIGRRRTQFADAPDADIEAIQQAMIEKEPVTIVISQKGWI 528
               ++ E+ EV+  +A       RRT+  D    D+E   + +IE+E + + I+  G+I
Sbjct: 494 ILGIISDELREVRDNFAVP-----RRTEIVDW-SGDME--DEDLIEREDMVVTITSGGYI 545

Query: 529 --------RALKGHMSDTSALTFKEGDGPKLAFPAQTTDKLLLLTTGGKAYTLGADKLP- 579
                   RA K      S +  KE D     F A T  +LL  TT G  Y L   +LP 
Sbjct: 546 KRTPLVDFRAQKRGGKGLSGMQTKEEDVVTNLFVANTHTQLLFFTTDGMVYKLKTWRLPQ 605

Query: 580 GGR 582
           GGR
Sbjct: 606 GGR 608