Pairwise Alignments

Query, 429 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  124 bits (312), Expect = 4e-33
 Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 11/332 (3%)

Query: 45  ISAAYSIGFALGCISVTQLMRRIGHIRTFATMAAVASAASIAMPLVLHPLFWMLMRFVIG 104
           +++ +  G   G +     + R+GH + F    ++   + + MPL+ +   W+L R V G
Sbjct: 49  LASVFYAGLLAGALVAEPFVNRLGHRKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAG 108

Query: 105 IAVACLFAAIESWINAQVTNSNRARTLSIYRFVDLGSVTLAQYIIPIAGIDGPVVFSLIA 164
           IAVA +F  +ESW+        RA+ L IY     G   L Q  I   G+ G V F  I 
Sbjct: 109 IAVAGIFVVVESWL-LHGDEQGRAKRLGIYMVSLYGGTALGQMAIGQLGVAGAVPFIAIT 167

Query: 165 MALTLSLVPISIADKSNPTPPKQIPFNLFAVWRISPLAVVGCVAVGLSMAAFRNMGPIYA 224
             L ++ + +   D   P+  +    +L  ++++S  A++GC+  GL++ A   + P+  
Sbjct: 168 TLLLIASIVLMYVDSDQPSTQQASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVEL 227

Query: 225 EQIGMSVTAIATFMSAGIIGGVVLQYPLGVYSDRYDRRIIILATTAGSVIVGLFLAFFAG 284
              G+S T +   M+  I+GG+ +Q PL  +  ++  R + +A         + L  F  
Sbjct: 228 ANRGISHTDLGNLMALVILGGMAVQ-PLVPWLSKFLGRTLQMALFCLLGTAAITLTVF-- 284

Query: 285 TDEWSNIIGV--FVFGAFALPLYSLSSAHGNDHAREGEHAMMSAGLLFFWSVGATVGPLL 342
            D+   ++GV  F+ G     LY ++   G D          +  +L  +SVG+ VGP+L
Sbjct: 285 -DDSLLVLGVSLFILGMATFALYPIAINLGCDKLDASYIVSATQVMLLSYSVGSVVGPVL 343

Query: 343 ASLLI-DQFGPKALFSYTAAIQIVFIAYTLYR 373
           A   + D+ G   L +Y  AI +    Y L +
Sbjct: 344 ADCFMQDRHG---LMAYLFAILLATCLYMLIK 372



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 6/159 (3%)

Query: 24  QGTYIALRGLSEGFSASTIGLISAAYSIGFALGCISVTQLMRRIGHIRTFATMAAVASAA 83
           Q + ++LR + +   A+ IG + +  ++G   G + V    R I H      MA V    
Sbjct: 189 QASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILGG 248

Query: 84  SIAMPLVLHPLFWMLMRFVIGIAVACLFAAIESWINAQVTNSNRARTLSIYRFVDLGSVT 143
               PLV  P     +   + +A+ CL       +       +    L +  F+ LG  T
Sbjct: 249 MAVQPLV--PWLSKFLGRTLQMALFCLLGTAAITL---TVFDDSLLVLGVSLFI-LGMAT 302

Query: 144 LAQYIIPIAGIDGPVVFSLIAMALTLSLVPISIADKSNP 182
            A Y I I      +  S I  A  + L+  S+     P
Sbjct: 303 FALYPIAINLGCDKLDASYIVSATQVMLLSYSVGSVVGP 341