Pairwise Alignments

Query, 642 a.a., excinuclease ABC chain C from Agrobacterium fabrum C58

Subject, 674 a.a., excinuclease ABC subunit C from Sinorhizobium meliloti 1021

 Score = 1079 bits (2791), Expect = 0.0
 Identities = 535/639 (83%), Positives = 573/639 (89%), Gaps = 4/639 (0%)

Query: 3   WNAGWKNESGLKGMDLIGEFVKHLPNSPGVYRMFNEAGDVLYVGKARSLKKRVGNYAQGR 62
           W       +GLKG +LI  FVK LPN PGVYRM NEAGDVLYVGKARSLKKRV NYAQGR
Sbjct: 39  WAESLPEAAGLKGAELIQAFVKRLPNGPGVYRMLNEAGDVLYVGKARSLKKRVSNYAQGR 98

Query: 63  VHSNRIAQMVRFTTHMEFVTTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITAD 122
            HSNRIA+MVR T HMEFVTTRTE EALLLEANLIKRLRPRFNVLLRDDKSFPYI++T D
Sbjct: 99  GHSNRIARMVRETAHMEFVTTRTEIEALLLEANLIKRLRPRFNVLLRDDKSFPYIVVTGD 158

Query: 123 NRAPAIFKHRGARARKGDYFGPFASAGAVGRTINSLQRAFLIRTCTDSVFETRTRPCLLY 182
            RAPA++KHRGAR+RKGDYFGPFASAGAVGRTINSLQRAFL+RTCTDSVFETRTRPCLLY
Sbjct: 159 TRAPALYKHRGARSRKGDYFGPFASAGAVGRTINSLQRAFLLRTCTDSVFETRTRPCLLY 218

Query: 183 QIKRCSGPCTHEVSDEGYAELVKEAKDFLSGKSQAVKTAIARQMNEASEDLDFERAAIYR 242
           QIKRCS PCT+EVSD  YAELV EAKDFLSGKSQAVK  IA  M EASE+LDFERAA+YR
Sbjct: 219 QIKRCSAPCTNEVSDADYAELVSEAKDFLSGKSQAVKATIASAMAEASENLDFERAALYR 278

Query: 243 DRLAALSHVQSHQGINPAGIEEADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADPS 302
           DRLAALSHVQSHQGINPAG+EEADVFA HHEGGISCIQVFFFRTGQNWGNRAYFPKADPS
Sbjct: 279 DRLAALSHVQSHQGINPAGVEEADVFATHHEGGISCIQVFFFRTGQNWGNRAYFPKADPS 338

Query: 303 LPGSEILNAFLAQFYDDKPVPKQILLSETVEEQELLAAALGEKAGHKVTISVPQRGEKKD 362
           +P +E+L+AFLAQFYDDKP P+Q+LL   VEEQELLA AL EK+G+KV+I VPQRGEKKD
Sbjct: 339 IPPAEVLSAFLAQFYDDKPCPRQVLLCAPVEEQELLAQALSEKSGYKVSILVPQRGEKKD 398

Query: 363 ITDHVLANAREAHGRKLAETSSQARLLKGFAETFNLPYVPRRIEIYDNSHIMGTNAVGGM 422
           + +H LANAREAHGRKLAET+SQ RLL+GFA TF LPYVPRRIEIYDNSHIMGTNAVGGM
Sbjct: 399 LVEHALANAREAHGRKLAETASQGRLLEGFAATFQLPYVPRRIEIYDNSHIMGTNAVGGM 458

Query: 423 VVAGPEGFVKNQYRKFNIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDRAQTPTPEE 482
           VVAGPEGFVK QYRKFNIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDR+  P    
Sbjct: 459 VVAGPEGFVKGQYRKFNIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDRSAEP---- 514

Query: 483 AADLPFPAWPDVILIDGGQGQMTAVRAILDELGIRDCVTAIGVAKGVDREAGRERFFADG 542
             D  FPAWPDVILIDGGQGQMTAVR IL ELGI DCVTAIGVAKGVDR+AGRERFFA+G
Sbjct: 515 GEDAGFPAWPDVILIDGGQGQMTAVRTILKELGIEDCVTAIGVAKGVDRDAGRERFFAEG 574

Query: 543 RSDFSLPPRDPVLYFIQRMRDEAHRFAIGSHRARRKKEMVRNPLDEISGIGPGRKRSLLQ 602
           R  F+LPPRDPVLYFIQR+RDEAHRFAIGSHRARRKKEMV+NPLDEI+GIGP RKR+LL 
Sbjct: 575 RESFTLPPRDPVLYFIQRLRDEAHRFAIGSHRARRKKEMVKNPLDEIAGIGPTRKRALLT 634

Query: 603 HFGTAKAVSRAGLNDLMTVTGISETVARQIYNHFHESGS 641
           HFGTAKAVSRAG+NDLM+V GISETVAR +Y HFHE  +
Sbjct: 635 HFGTAKAVSRAGINDLMSVNGISETVARIVYEHFHEDAA 673