Pairwise Alignments

Query, 320 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 8e-23
 Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 16/271 (5%)

Query: 39  EIDIIGQRHNLPGFSRIEA-EQMASATFDTLTQISARLEASLKRTETFMDALQQDEDSEP 97
           E+ + G  H  PGF +I+  E + +     LT  S          + ++++   DE    
Sbjct: 249 EVTLHGSHH--PGFDQIQQREGLKTLATQILTSPSVGASYYADGQKVYLNSRWVDEFQWY 306

Query: 98  PATERFLELLGDIHEEQT----SLRHFIAMGLVKIREAERNRVE--LQAASLRDSLTALP 151
              E+  E   DI  + T    ++  F+A+G++ + +      +  L+  ++RD LT   
Sbjct: 307 IIVEQKDEFNHDIWFKATLGNLAISAFVALGVLGLAQMSFRGYQKRLEDMAVRDKLTGAY 366

Query: 152 NRAAFLEKLG-ALFAKDRAASATSLVLLDIDHFREINGKYGSSAGNKALRRLAALFRKTI 210
           NR  F E +  A+   ++ +   SL ++D+DHF+++N  YG  AG+  L+R+ AL ++ I
Sbjct: 367 NRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVNDNYGHPAGDLVLQRVVALCQRHI 426

Query: 211 KKDDFVARIGGDEFAFLFAGVPQNTAEAIAERLRQSVEALHFATSGGDGEHLTVSIGVAA 270
            +   + R GG+EF  L   + Q  A    E +R  + A+H          +TVSIGV  
Sbjct: 427 AQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIRAEI-AMH-----ASQPQVTVSIGVVQ 480

Query: 271 VDGTATAAEFFGHAELALLSARSGTRNCVIG 301
                +    F  A+ A+ +A+S  RN V+G
Sbjct: 481 YQQNESLLHLFNRADQAMYTAKSEGRNKVVG 511