Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 692 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

 Score =  139 bits (350), Expect = 4e-37
 Identities = 167/608 (27%), Positives = 259/608 (42%), Gaps = 41/608 (6%)

Query: 57  ATGFLLTLLVSEFIQLPSKPYIRSDLLFLAGVVGSWQGGLISLALISAGRFLFGGPALFG 116
           ++GF L L+     +LP+       L+  AG+      G+ +L +     +    P LFG
Sbjct: 89  SSGFALWLVSQP--RLPAWQLAFGALIMGAGISAMHYTGMAALRMQPGIDY---DPTLFG 143

Query: 117 AAFLDMSVISAFGIAIYGWMRRR----RLTELGMREIAGVFAIRIFAALFAICLTYGLGM 172
           A+ +     SA  + I   +R+     RL   G   + G+  + +     A         
Sbjct: 144 ASLVIAVGASAAALWIAFRLRQNTPHVRLARAGAAVVMGIAIVGMHYTGMAGARFSEGSF 203

Query: 173 VGQDVFLSNVG--RRIVGATVGLPMIACLFLLL--RSEARAREAVKKREVAART------ 222
            G    LS  G    ++  T+ +  IA L  +L  R EAR  E  +    A R       
Sbjct: 204 CGSLDGLSGKGLDNLVLITTLAVLAIALLTSILDARLEARTAELAQSLTRANRELTQLAL 263

Query: 223 -DSLTGLPNRRALKDHIEMTTR--QAPAVPHALLLIEIVNIADVAAYQGDDWADLFWPKL 279
            D LT LPNR  L D I+      Q      AL+ I++     V    G    DL    +
Sbjct: 264 HDPLTELPNRVLLADRIDQAMHRVQEQGGCFALMFIDLDGFKPVNDAFGHHMGDLLLRDV 323

Query: 280 AREICDGENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSESAGLVLHLHEGLIA-FFRS 338
           A  + +       +  D  + + GD  + +V     L + + A  +     GLI   FR 
Sbjct: 324 ALRLRED-----LRSQDTLARIGGDEFVLLV----QLAEPDDALRLAARQVGLIGRTFRV 374

Query: 339 AEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSE----NPVQIFPFSFAEKAARD 394
           +E        +G A L   + Q+    L +   A+  ++    N    F  S    A + 
Sbjct: 375 SEHDLQISASVGIA-LYPGNGQSAEELLMNADAAMYHAKGAGKNGYSFFDASMNSNARKQ 433

Query: 395 EGVRQMLVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALSPYYVLEIAERH 454
             + Q L   ++  +  + YQPKF+  N R +GAEALLR        L P   +++AE+ 
Sbjct: 434 LQLLQDLRMAVEQRQFSLHYQPKFDAANGRPVGAEALLRWTHPTQGLLMPDTFIDLAEKT 493

Query: 455 RLLVEF-EWSTIEAVVRDLAELPGLD-PDFHLAVNISASSFATACFADRVVALLQEMTVP 512
            L++   EW   EA  R + E   L   D+ +AVN+SA  F        V   L+   +P
Sbjct: 494 GLIIPIGEWVLNEAC-RQMREWYVLGYTDWRIAVNLSALQFCHTGLVQSVAKALETHKLP 552

Query: 513 AHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTLLARFPFEEVKID 572
           A+ L++E+TE + M   D+       L   GV L++DDFGTGY++L  L R P  E+KID
Sbjct: 553 ANSLTLEITETTAMSDADASMTVLQLLSDMGVDLSIDDFGTGYSSLMYLKRLPANELKID 612

Query: 573 QWMTSRLDQARFRDAVVLAFES-AERYGAKLVTEGIETEEQCRILMQMGIRFGQGYLYSP 631
           +     L+      A+V A  +  +  G ++V EG+ET+ Q   L Q+G    QGYL   
Sbjct: 613 RGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVETDVQQDFLTQLGCDSLQGYLLGH 672

Query: 632 AVPLDRLL 639
            +P +R L
Sbjct: 673 PLPAERFL 680