Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 693 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  143 bits (360), Expect = 3e-38
 Identities = 181/633 (28%), Positives = 273/633 (43%), Gaps = 69/633 (10%)

Query: 51  YGVVFGATGFLLTLLVSEFI-------QLPSKPYIRSDLLFLAGVVGSWQGGLISLALIS 103
           Y V   A   L+ +L   F        QLP+       L+  AG+      G+ ++ +  
Sbjct: 74  YDVTLTALSLLIAVLSCGFALWLVSQPQLPAWQLAFGALVMGAGISAMHYTGMAAMRMQP 133

Query: 104 AGRFLFGGPALFGAAFLDMSVISAFGIAIYGWMRRRR------LTELGMREIAGVFAIRI 157
              +    PALF A+ L    + A G A++   R RR      L   G   I G+  + +
Sbjct: 134 GIDY---DPALFSASLL--IAVGASGAALWIAFRLRRQAPYVRLIRGGAAVIMGIAIVGM 188

Query: 158 F-----AALFA---ICLTYGLGMVGQDVFLSNVGRRIVGATVGLPMIACLFLLLRSEARA 209
                 AA FA    C     G+ G+   L N+   ++  T+ +  IA L  +L +   A
Sbjct: 189 HYTGMAAARFADGSFCGAAADGLNGEG--LDNL---VLITTLAVLSIALLTSILDARLEA 243

Query: 210 R---------EAVKKREVAARTDSLTGLPNRRALKDHIE--MTTRQAPAVPHALLLIEIV 258
           R         EA ++    A  D+LTGLPNR  L D I+  M+  Q      AL+ I++ 
Sbjct: 244 RTADLAHSLTEANRELTQLALHDTLTGLPNRVLLADRIDQAMSRVQEQGGCFALMFIDLD 303

Query: 259 NIADVAAYQGDDWADLFWPKLAREICDGENGLLSKFN----DPRSFMFGDATLAVVIEGV 314
               V    G    D    +L RE+     GL  + +    D  + + GD  + +V    
Sbjct: 304 GFKPVNDAFGHHMGD----QLLREV-----GLRLREDLRSQDTLARIGGDEFVLLV---- 350

Query: 315 SLEKSESAGLVLHLHEGLIA-FFRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLAL 373
            L +   A  +     GLIA  FR AE        +G A L   + Q     L +   A+
Sbjct: 351 QLAEPNDALNLAARQVGLIARSFRVAEHDLQISASVGIA-LYPGNGQTAEELLMNADAAM 409

Query: 374 RRSE----NPVQIFPFSFAEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEIHNRRMIGAE 429
             ++    N    F  S    A +   + Q L   +   +  ++YQPKF+  + R +GAE
Sbjct: 410 YHAKGAGKNGHSFFDASMNSNARKQLQLLQDLRNALDQQQFSLYYQPKFDAGHGRPVGAE 469

Query: 430 ALLRAIDTHGQALSPYYVLEIAERHRLLVEF-EWSTIEAVVRDLAELPGLD-PDFHLAVN 487
           ALLR        L P   +++AE+  L++   EW   EA  R + E   L   D+ +AVN
Sbjct: 470 ALLRWEHPTQGMLQPDSFIDLAEKTGLIIPIGEWVLNEAC-RQMREWYVLGYTDWRIAVN 528

Query: 488 ISASSFATACFADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLA 547
           +SA  F  A     V   L    +PA+ L++E+TE + M   D+       L   GV L+
Sbjct: 529 LSALQFCHAGLVQSVAKALATHHLPANSLTLEITETTAMSDADASMTVLQELSDMGVDLS 588

Query: 548 LDDFGTGYAALTLLARFPFEEVKIDQWMTSRLDQARFRDAVVLAFES-AERYGAKLVTEG 606
           +DDFGTGY++L  L R P  E+KID+     L+      A+V A  +  +  G ++V EG
Sbjct: 589 IDDFGTGYSSLMYLKRLPANELKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEG 648

Query: 607 IETEEQCRILMQMGIRFGQGYLYSPAVPLDRLL 639
           +ET  Q   L Q+G    QGYL    +P DR +
Sbjct: 649 VETGVQQDFLTQLGCDSLQGYLLGHPLPADRFM 681