Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (332), Expect = 5e-35
 Identities = 124/450 (27%), Positives = 209/450 (46%), Gaps = 25/450 (5%)

Query: 196 IACLFLLLRSEARAREAVKKREVAARTDSL-TGLPNRRALKDHIEMTTRQ-APAVPHALL 253
           IA L   L  E   R A +++    R+  L TG  NR AL+  + M   Q A     A++
Sbjct: 178 IASLNQSLHQEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEELAVI 237

Query: 254 LIEIVNIADVAAYQGDD-WADLFWPKLARE----ICDGENGLLSKFNDPRSFMFGDATLA 308
            I   N   + A  G   W D+   K  RE    + +GE  LL+    P S       L 
Sbjct: 238 HIGFANARQLQARLGYHLWDDVL--KQLRERLGPVTEGE--LLTA--RPNS-----TNLT 286

Query: 309 VVIEGVSLEKSESAGLVLHLHEGLIAFFRSAEAGPVPHLK--IGAA-NLEMVSHQNVASF 365
           ++++   L+   +      +H G   F    E  PV HL   IG A + E    Q +   
Sbjct: 287 LILKAHPLDTQLNQLCHRLIHAGQAQFV--TEGLPV-HLNPYIGVALSRETRDPQQLLRH 343

Query: 366 LRHLSLALRRSENPVQIFPFSFAEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEIHNRRM 425
                LA + S   V     + A+  AR   +   L++ ++N    +++QPK  +  +R 
Sbjct: 344 AVSSMLACKDSGYKVFFHSPALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRW 403

Query: 426 IGAEALLRAIDTHGQALSPYYVLEIAERHRLLVEFEWSTIEAVVRDLAELPGLDPDFHLA 485
           +GAEALLR         S   ++ +AE++ L+ E     +   ++  ++   + P F +A
Sbjct: 404 VGAEALLRWKHPVLGEFSNETLIHMAEQNGLIFEVGHFVLHQALKAASDWLAVCPTFCIA 463

Query: 486 VNISASSFATACFADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVR 545
           +N+S+     + F +++  LL     PAH+L +E+TE   +    +     + L   GV 
Sbjct: 464 INVSSVQLKNSGFVEQIRDLLALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVT 523

Query: 546 LALDDFGTGYAALTLLARFPFEEVKIDQWMTSRLDQARFRDAVVLA-FESAERYGAKLVT 604
           L+LDDFGTGYA+   L +FPF+ +KID+    +++ +     +V +    A++    +V 
Sbjct: 524 LSLDDFGTGYASFQYLKKFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVV 583

Query: 605 EGIETEEQCRILMQMGIRFGQGYLYSPAVP 634
           EGIE+ +Q + +++ G   GQG+LY   +P
Sbjct: 584 EGIESTQQEQFILEQGCDVGQGFLYGKPMP 613