Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (314), Expect = 8e-33
 Identities = 114/419 (27%), Positives = 195/419 (46%), Gaps = 29/419 (6%)

Query: 223 DSLTGLPNRRALKDHIEMTTRQAPAVPHALLLIEIVNIADVAAYQGDDWADLFWPKLARE 282
           DSLT L +R  L +H      Q P +   L+LI I    D+    G   AD     +A+ 
Sbjct: 431 DSLTQLLSREGLVEHCH----QIPQLNGGLILIGIDKFRDINDSLGHHQADQLLVAIAQR 486

Query: 283 ICDGENGLLSKFNDPRSFM-FGDATLAVVIEGVSLEKSESAGLVLHLHEGLIAFFRSAEA 341
                  L   F +P      G    A+ +  V+ +    +     +   ++  F S  +
Sbjct: 487 -------LKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKS-----VATDILKLFASPFS 534

Query: 342 GPVPHLKIGAA-NLEMVSHQNVASFLRHLSLALRRSENPVQIFPFSFAEKAARDEGVRQM 400
            P  ++ +  +  +  +   N+  +LR+ S+AL  ++       F ++ + A     R +
Sbjct: 535 MPSDNIAVNVSIGIVYLEEPNMTVWLRNGSIALSNAKAEHTHISF-YSPEMANASRKRML 593

Query: 401 LVRWIK----NGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALSPYYVLEIAERHRL 456
           +V  IK    N +   FYQP  ++++  ++GAEAL R I      + P   + IAE   L
Sbjct: 594 MVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGL 653

Query: 457 LVEFEWSTIEAV----VRDLAELPGLDPDFHLAVNISASSFATACFADRVVALLQEMTVP 512
           +       +       VR +AE       FH+ VN+S +  +   F  ++ ++L E  + 
Sbjct: 654 INAIGEQILRQACADTVRGIAENKW-PSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQ 712

Query: 513 AHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTLLARFPFEEVKID 572
              L++E+TE   +     +  N   L  A + +A+DDFGTGY++L  L + PF+ +KID
Sbjct: 713 PTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKID 772

Query: 573 QWMTSRLDQARFRDAVVLAFESAER-YGAKLVTEGIETEEQCRILMQMGIRFGQGYLYS 630
           +   S+L+     ++VV A  +  R +  +LV EGIET+EQ  +L Q+G   GQG+L+S
Sbjct: 773 REFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFS 831