Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 917 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  137 bits (346), Expect = 2e-36
 Identities = 127/446 (28%), Positives = 202/446 (45%), Gaps = 49/446 (10%)

Query: 220 ARTDSLTGLPNRRALKDHIEMTTRQAPAVPHA------LLLIEIVNIADVAAYQGDDWAD 273
           A  DSLT LPNR    D +    RQA A+         ++L+++    ++    G  + D
Sbjct: 485 ANYDSLTDLPNRSLALDRL----RQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGD 540

Query: 274 LFWPKLAREICDGENGLLSKFNDPR----SFMFGDATLAV---VIEGVSLEKSE------ 320
               ++A+ +         +++ PR    S + GD  L +   V E + LEK        
Sbjct: 541 CLLQEIAKRL---------RYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKI 591

Query: 321 -SAGLVLHLHEGLIAFFRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSENP 379
            S  + +   E +I    +A  G   +   G     ++ + + A +      A R   N 
Sbjct: 592 ISQPITIEAEELVI----TASIGVACYPNDGVTPEVLMRNADTAMYS-----AKRNGGND 642

Query: 380 VQIF-PFSFAEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTH 438
            Q+F P   AE  AR + +   L   ++  +  +FYQP   + +  ++G EAL R  D  
Sbjct: 643 FQLFMPTMNAEAHARIQ-LETHLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPE 701

Query: 439 GQALSPYYVLEIAERHRLLVEFEWSTIEAVVRDLAELPG-LDPDFHLAVNISASSFATAC 497
              + P   + IAE   L++   +  IE   +D+A      +  F +AVN+S     +  
Sbjct: 702 LGNIPPDRFIPIAEETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNR 761

Query: 498 FADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAA 557
           F      +LQ      + L +EVTE   +  T ++ Q  DTL   G+ LALDDFGTGY+A
Sbjct: 762 FTQITAKILQRHNFRPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSA 821

Query: 558 LTLLARFPFEEVKIDQWMTSRLDQARFRDAVVLAFES-AERYGAKLVTEGIETEEQCRIL 616
           L+ L R+PF+ +K+DQ     +  +    A+V    + A   G + V EG+ET EQ   L
Sbjct: 822 LSYLRRYPFQSLKVDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFL 881

Query: 617 MQMGIRFGQGYLYS---PAVPLDRLL 639
             +G  +GQGY +S   PAV +D  L
Sbjct: 882 KAIGCEYGQGYWFSRPLPAVEIDSFL 907