Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 793 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  130 bits (327), Expect = 2e-34
 Identities = 118/419 (28%), Positives = 177/419 (42%), Gaps = 14/419 (3%)

Query: 222 TDSLTGLPNRRALKDHIEMTTRQAPAVPHALLLIEIVNIADVAAYQGDDWAD---LFWPK 278
           TD LT L NR  L+  I       P  P ALLLI +     +   QG D  +   L    
Sbjct: 360 TDLLTSLGNRMGLEQQIREMIILHPEQPFALLLINLDGFKRINDGQGFDVGNELLLMAAN 419

Query: 279 LAREICDGENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSESAGLVLHLHEGLIAFFRS 338
             R    G + L     D  + +  +     +   V+    E+ GL   L  G    F  
Sbjct: 420 RLRNCIKGSDWLGRTSGDEFALLLPNVEGQEIPAKVAHRIVETLGLAYEL--GDTPAFVG 477

Query: 339 AEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSENPVQIFPFSFAEKAARDEGVR 398
           +  G   + + G   L ++ +  +A     L    R      Q F  S A  A     + 
Sbjct: 478 SSVGIALYPEDGRELLTLLRNAELA-----LDRVKRSGGRDYQFFHPSMAAAAENRRRLE 532

Query: 399 QMLVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALSPYYVLEIAERHRLLV 458
             L    +  +  +FYQP  +I   R+ GAEAL+R +      + P   + +AE   L+ 
Sbjct: 533 NELRLAAERQELRLFYQPIVDIQQNRLAGAEALIRWVHPQQGMVPPDDFIPVAEETGLIQ 592

Query: 459 EFEWSTIEAVVRDLAEL--PGLDPDFHLAVNISASSFATACFADRVVALLQEMTVPAHRL 516
           E     +E     L +    G + D +L++N+S S          V+  L   ++P   L
Sbjct: 593 EIGLWVLETACDQLQQWRREGRE-DLYLSINVSGSQIPHGLPPSAVMEALSRRSLPPGAL 651

Query: 517 SIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTLLARFPFEEVKIDQWMT 576
            +E+TE   M       +    L   G+R+ LDDFGTGY++L+ L RFP   VK+D+   
Sbjct: 652 VLEITEGVLMSDMKQALEWLQALRQVGIRIYLDDFGTGYSSLSYLKRFPVTTVKVDKSFV 711

Query: 577 SRLDQARFRDAVVLAFESAER-YGAKLVTEGIETEEQCRILMQMGIRFGQGYLYSPAVP 634
             + Q     A+V A  +  R  G ++V EG+E E Q  +L  MG R+GQGY +S  VP
Sbjct: 712 RDMGQDSSDRALVEAIVAMTRSLGLEVVAEGVENEAQLALLRSMGTRYGQGYHFSRPVP 770