Pairwise Alignments

Query, 362 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 367 a.a., Predicted permeases from Phaeobacter inhibens DSM 17395

 Score =  150 bits (380), Expect = 4e-41
 Identities = 113/376 (30%), Positives = 178/376 (47%), Gaps = 28/376 (7%)

Query: 5   TLARYFLKRYLMTTIWF--VLGVS-SIIYLADFSETARRMSGLPGYSVPAALGLTALRLP 61
           TL  Y+ +R+L    WF  + GV  +++ L D +E  RR       S+    GLT L  P
Sbjct: 2   TLDFYYARRFLQ---WFAVICGVLLTLVMLIDLNEQIRRFEA-QDLSLGQLFGLTLLNTP 57

Query: 62  LILQQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVL 121
             L + +P I +   +   I L R  ELVVTRA G S  + +   VL A  IG+L+V  L
Sbjct: 58  AALSEFLPLIMILTTIVLFIGLARSSELVVTRAIGRSGIRALAAPVLLAALIGVLAVSTL 117

Query: 122 NPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIP---WMRQSSGGKDTIIGAKSF--EDNGT 176
           NPI A   N+   +    RN  GG     +     W+RQ      ++I A  +  + +  
Sbjct: 118 NPIVAATSNRYRDLAETYRN--GGPAALSLTGEGLWLRQGGAQGQSVIHATGYSGDTDDI 175

Query: 177 MLLDVVLIDVDKDGNIVSRKDAKSAKLEDGYW---------LLNGVS-ETRAGHVPVRQE 226
            L DV ++    +G  + +  A+ A L+ G W         L+ GV+ ET A     R  
Sbjct: 176 TLYDVTILSYGPEGRPIRQTLAEEAALDGGDWVLIKAKVWPLIVGVNPETNAE----RHS 231

Query: 227 SMQISTNLRREFVQERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLV 286
           ++++ST L  E +++ +     ++ +DL   I      G S+K  E      L+ PL L+
Sbjct: 232 TLRLSTTLTSERIRDTLGTATGISVYDLPATIRELSEAGFSTKRYEVWLQVELARPLFLI 291

Query: 287 AMTLIAATVSLKFSRFAQSRSVILGGIVSGFVLYVVTVLVRAFGSGGVVPPTVAVWVPVI 346
           AM L+ A  +++ +RF  +   +L  ++ GF LY +    +  G  G +P  +A W P +
Sbjct: 292 AMALVGAAFTMRHARFGGTGLAVLTAVLLGFGLYFLRNFAQILGENGQIPVALAGWAPPV 351

Query: 347 VALALGATILLHQEDG 362
            A+ L   +LLH EDG
Sbjct: 352 AAILLTMGLLLHAEDG 367