Pairwise Alignments

Query, 793 a.a., organic solvent tolerance protein from Agrobacterium fabrum C58

Subject, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

 Score = 96.7 bits (239), Expect = 4e-24
 Identities = 161/725 (22%), Positives = 259/725 (35%), Gaps = 109/725 (15%)

Query: 61  DSQRVIAKGVVRMNYSGYRMVAQQVEYNQQTGRVIAHGNIELIE--------PGGNKIYA 112
           + Q+    G V +     R+ A  V  +QQ   V+A GN++  +           N +  
Sbjct: 71  NGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSDGEIKTHSTKATNHLNT 130

Query: 113 DEMDVTDDFGQGFVNALRVETTDNTRIAGESAERLNSDTMVLNNGVYTACLPCAERPEKA 172
           DEM + +   Q      R E    ++      E        + +G  T+C      P+  
Sbjct: 131 DEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYE--------IEDGSITSC------PDGD 176

Query: 173 PLWQVKAERVIQDGKTHTVRLEKARLQLFGHSIAYIPFLTVPDNTVKRKSGFLFPQMSMT 232
             W+++A  +  D           RL++    + Y+P+LTVP     RK+GFL+P  S  
Sbjct: 177 NAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDT-RKTGFLYPTASYG 235

Query: 233 NKLGFGIGVPYFQVLSDTSDLTVTPTYYTKQGLLLQAELRQRFETGMHTLTIAGISQQSS 292
           ++ G+   VP +  L+   DL  T  Y  K+G  L +  R         LT  G  Q  S
Sbjct: 236 SRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRY--------LTDFGAGQIKS 287

Query: 293 DTFISGTSDALNDQRGMVATKGDFRINPRWAFGWDAMVQSD-NNFSRTYSLKGYKND--- 348
           +             R     + +      W F  D    SD N FS   S  G + D   
Sbjct: 288 EYLADDQLHTELGDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGVGNREDGQL 347

Query: 349 VQTNQIYLTGTGERNSFDARGYYFNVQDTDNSELKERKQAIVHPVVDYRYFLPDPIYGGE 408
           +Q  +         ++   R +    +DT ++ L  R    + P + Y Y+ P+ +   +
Sbjct: 348 IQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYR----LMPQLSYNYYAPETMKYLD 403

Query: 409 LSLTTNFTSISRSTQDSYAMGGFPRFNGLEGSYTRWTTEAEWKRTITMDSGLQITPILAA 468
           L L ++ +                          R+ T+A  K + T    + I P L  
Sbjct: 404 LDLVSHVS--------------------------RFETDARGKPSATR---VHIEPGLKI 434

Query: 469 RGDALWTDMTAASFTSGGTSYAYEGMINDDAALRGMVT---------GGLELRYPWLFTA 519
                W + T  +   G T Y  +     DA L   VT          G+ L    +   
Sbjct: 435 PFSNTWGNWTTEARVLG-TYYQQDLDKTTDAKLEESVTRVIPEIRSVAGIVLERDTVLLD 493

Query: 520 LNSNHVIEPIAQIFVRPNEQYAGRFPNEDAQAFVFDATNLFERDKFSGFDRIEGGTRANI 579
            +    +EP  Q    P E+Y       D+     D   LF   K+SG DRIE   + + 
Sbjct: 494 -DYTQTLEPKIQYLYVP-EKYQDNIGLYDSTLLQTDYYGLFRSRKYSGVDRIESANQVSY 551

Query: 580 GFRYNGTFDNGY--GIRAIAGQSFHLAGENSFASYDLLNVGANSGLESDRSDYVAMAA-- 635
           G      FD+ Y   +    GQ F+L  +       L     N    SD++ Y A A   
Sbjct: 552 G-ASTRFFDSNYKERLNIAFGQIFYLDSK-------LNPSNKNPDSTSDKTSYSAWAVEM 603

Query: 636 -FDAPIGLSLSSSLRLDKDNFEINRSETGISYSDRRINGKLSYTQVKAQPEYGYNE---- 690
            F+    L     ++ D D+  +    + + Y  R  +G +         +Y  N     
Sbjct: 604 DFNFADYLFYHGGIQYDIDSQAVQLGNSTLEY--RVASGYIQANYRYVAKDYIRNTVGDS 661

Query: 691 -------NRDIIQASGSL---RMDDNWSLFGSINYDLNGKFAAERRIGIAYQDECTILTV 740
                   RD I  +G L   ++   WS  G   YDL    A E    + Y  +C  +  
Sbjct: 662 ITNIDDITRDGISQAGILAGYQLSRKWSASGQYYYDLTTDEALEWLANLTYTSDCWYVGF 721

Query: 741 SYSDE 745
           +YS++
Sbjct: 722 TYSNQ 726