Pairwise Alignments

Query, 295 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 288 a.a., YicC family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  159 bits (401), Expect = 9e-44
 Identities = 108/303 (35%), Positives = 164/303 (54%), Gaps = 26/303 (8%)

Query: 3   LQSMTGFARSEGTSGRYRWAWELRSVNGKGLDVRLRLPTGLEALETGLREIASEHLSRGN 62
           + SMT +AR E         WE+RSVN + L+   RLP     LE  LRE   + LSRG 
Sbjct: 2   IYSMTAYARKEVKGDWGSAVWEIRSVNQRYLETYFRLPEQFRGLEPLLRERFRQRLSRGK 61

Query: 63  IQAGLT----------LAIAENRLEAVINRDALAAVLALKKELGDVVDDKPLSFDTLLTL 112
           I+  L           L I E   + VIN  A   ++ +  EL  +   + + +      
Sbjct: 62  IECHLRFEANPAAQSHLTINEGLAQQVIN--AANQIMHMTGELSRINPFQVMQWP----- 114

Query: 113 RGLVDFREAEDDAEAQAARNGEVLAGFAAAVEKLKDMREREGASLFAILSGHINRIEQLV 172
            G+++  E + DA  QA     +L+ F   V++    R REG ++ A++   +  I   V
Sbjct: 115 -GVMETPEQDMDAINQA-----LLSAFDEGVDEFIAARGREGDNMKALIEQRLQAISAEV 168

Query: 173 DIIENDPSRQPEQIAARLAQQIALIGDGMHGLDRDRLHAEAALIATKADLREEIDRLHAH 232
             +    +R PE +  +  +  +   +    LD  R+  E  L+A K+D+ EE+DRL +H
Sbjct: 169 VKVR---ARMPEILEWQRERLFSKFEEAKIELDASRVEQELILLAQKSDVAEELDRLDSH 225

Query: 233 VQASRELLENGGPVGRKLDFLAQEFNRESNTICSKSNASAVTAAGIELKVVIDQFREQVQ 292
           V+ +RE+L+ GG  GRKLDF+ QEFNRESNT+ SKS ++ +TA+G+ELKV+I+Q REQ+Q
Sbjct: 226 VKEAREVLKKGGSCGRKLDFMMQEFNRESNTLASKSISTDITASGVELKVLIEQMREQIQ 285

Query: 293 NLE 295
           N+E
Sbjct: 286 NIE 288