Pairwise Alignments

Query, 355 a.a., secretion protein from Agrobacterium fabrum C58

Subject, 390 a.a., multidrug export protein EmrA from Klebsiella michiganensis M5al

 Score =  141 bits (356), Expect = 3e-38
 Identities = 112/338 (33%), Positives = 171/338 (50%), Gaps = 23/338 (6%)

Query: 11  ILVLLGGIAGVALVLYAWRLPPFLSTVEMTDNAFVRGYVTTMSPQVSGYVVNVPVKDYQE 70
           +L LL  I  VA  +Y W L   L   E TD+A+V G    +  QVSG V  V   +   
Sbjct: 26  LLTLLFIIVAVAYGIY-WFL--VLRHFEETDDAYVAGNQVQIMAQVSGSVTKVWADNTDY 82

Query: 71  VKQGTLLAKIDDRIYHQKQAQAEATLDTHKAALDNSRQQENAANANIRSSEAAVDSAEAS 130
           V++G  L  +D       Q  A+   +  +  L  S +Q      N +  +A+++  + +
Sbjct: 83  VQKGDPLVTLD-------QTDAQQAFEKAQTQLAASVRQTRQQMINSKQLQASIEVKKTA 135

Query: 131 LKQAQLASDRQDNLIKSGVGTSSLQEEAHAALEKARASLSQAKAALEVSRQDLQT----I 186
           L QAQ   +R+   I  G      +EE    L+ AR +++ A+A L+V+ Q        +
Sbjct: 136 LSQAQTDLNRR---IPLGAANLIGREE----LQHARDTVASAQAELDVAIQQYNANQAIV 188

Query: 187 IVNRSSLQAAVANAEAAVELARIDLANTEIRAPVDGRLGEVGVRTGQYVTAGTQLMAVVP 246
           +  +   Q AV  A   V  A + L  T+I +P+ G +    V+ G  +++ T LMAVVP
Sbjct: 189 LGTKLEQQPAVLQAATEVRNAWLALQRTKIVSPISGYVSRRSVQPGAQISSTTPLMAVVP 248

Query: 247 H-DVWVIANFKETQLAGMQVGQPVTISVDALHRR-KLTGHVERFSPATGSEFAVIKPDNA 304
             ++W+ ANFKETQLA M++GQP T+  D      K TG V      TGS F+++   NA
Sbjct: 249 ATNLWIDANFKETQLAHMRIGQPATVISDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNA 308

Query: 305 TGNFVKIAQRLGVRIVIDADQPLAAELSPGMSVVVHLD 342
           TGN++K+ QRL VRI +D  Q     L  G+S +V ++
Sbjct: 309 TGNWIKVVQRLPVRIELDEKQLAEHPLRIGLSTLVEVN 346