Pairwise Alignments

Query, 498 a.a., replicative DNA helicase from Agrobacterium fabrum C58

Subject, 468 a.a., replicative DNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  280 bits (716), Expect = 8e-80
 Identities = 170/492 (34%), Positives = 283/492 (57%), Gaps = 42/492 (8%)

Query: 6   RKITPAQPAEPHYREAPNNIEAEQALLGAILVNNDAYYRVSDFLKPVHLYEPLHRKIFEV 65
           RKI  AQ      +  P+++EAEQ+++G +L++N+ +  VS+ +     Y   HR IF+ 
Sbjct: 11  RKIPDAQVDA--IKVPPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSRPHRLIFDG 68

Query: 66  AGDIIRMGKTANPVTIKTFLPADDKIGDLTVAQYLARLAAEAVSIINAEDYGRAIYDLAL 125
              I+  GK  + +T+  +L   +++ D+    YLA LA    S  N   Y   + + AL
Sbjct: 69  VKSILEAGKPLDLITLSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYAEIVAERAL 128

Query: 126 RRALIQIGEDVVNIAYDAPLDMPPQAQIEDTERRLFELAETGRYDG-GFQSFNDAVALAI 184
            R LI +  ++ +  YD P     +  ++  E ++F +AE    +  G ++ +  +   +
Sbjct: 129 VRNLIGVANEIADAGYD-PQGRNAEDLLDLAESKVFAIAEARTSENEGPKNVDSILERTL 187

Query: 185 DMAGAAFE--RDGNLSGISTGIHSLDGRMGGLQRSDLIVLAGRPGMGKTSLATNIAYNIA 242
           +     ++  +DG ++G++TG   L+ +  GLQ SDLI++A RP MGKT+ A N+  N A
Sbjct: 188 ERIELLYKTPQDG-VTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAA 246

Query: 243 ASYEQEVQPDGSFKAKNGGVVGFYSLEMSSEQLATRIISEQTEVSSSKIRRGDITEADFE 302
              ++ V                +SLEM +EQ+  R+++  + V  +KIR G + + D+ 
Sbjct: 247 MEQDKPVL--------------IFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWA 292

Query: 303 KLIACSQ-MMQKVPLYIDQTGGISIAQLSARARRLKRQRG-LDVLVVDYIQLMTGAGKSG 360
           ++ +    +M+K  +YID + G++  ++ +RARR+ R+ G L +++VDY+QLM     + 
Sbjct: 293 RISSTMGILMEKKNMYIDDSSGLTPTEVRSRARRIAREHGGLSLIMVDYLQLMRVPALT- 351

Query: 361 ENRVQEITQITTGLKALGKELNVPIIALSQLSRAVENREDKRPQLSDLRESGSIEQDADV 420
           +NR  EI +I+  LKAL KELNVP++ALSQL+R++E R DKRP  SDLRESGSIEQDAD+
Sbjct: 352 DNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADL 411

Query: 421 VLFVFREEYYVKNMEPRDISDPKYAEWEALFDKVKGTADVIIAKQRHGPTGTVKLAFQSE 480
           ++F++R+E Y  +                    +KGTA++II KQR+GP G+V+L FQ  
Sbjct: 412 IMFIYRDEVYHPD------------------SPLKGTAEIIIGKQRNGPIGSVRLTFQGH 453

Query: 481 FTRFADLADPSF 492
           ++RF + A P+F
Sbjct: 454 YSRFDNYAGPAF 465