Pairwise Alignments

Query, 273 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (420), Expect = 5e-46
 Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 4/266 (1%)

Query: 7   ETTRFWRDRRFGGMECLSATFLTHEYSPHAHDTFSIGAIESGSQISTIQGTTEQTGPGHL 66
           E  +F     FGG+E L A + T  +S H+H+ +++G IE G+Q     G         +
Sbjct: 11  EQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSI 70

Query: 67  YLINPDEVHDGAPG-GGGYRYRMIYPDAELLRDIIEDVTGRVFHGMPSFPKFLPRDPQMA 125
            L+N DEVH G     GG+ Y+ +YP  E    + +++      G P FP+ +  DP++A
Sbjct: 71  ILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANT--GAPYFPQAVVYDPELA 128

Query: 126 ASFQMAHRRLEAKTGALEADEGMFSVLAALFGRHGSAIILAVETREKTA-VYNARDYLTD 184
           +  ++    LE  T  L  +  +++ L  L  RHG     A +       +   +++L D
Sbjct: 129 SQLRLVFETLEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDD 188

Query: 185 NYETDIGLEELASIAGLSRAHLIRAFRKEFHITPHAYLTDVRIRQARRLLRAGEMPAEVA 244
             + D+ LEELA +AGLS  HL+R F+K+F + PHAY    R+R A+ LL+ G   +E A
Sbjct: 189 FPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETA 248

Query: 245 ALCGFADQAHFTRHFKARTGVTPGQF 270
             CGF DQ+H  RHFK   G+TP Q+
Sbjct: 249 QECGFHDQSHLHRHFKKALGITPKQY 274