Pairwise Alignments

Query, 461 a.a., cysteinyl-tRNA synthetase from Agrobacterium fabrum C58

Subject, 459 a.a., cysteinyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  342 bits (876), Expect = 2e-98
 Identities = 204/482 (42%), Positives = 277/482 (57%), Gaps = 50/482 (10%)

Query: 5   LKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGED 64
           LK++N+++R+K EF PI    + MYVCG T+YD  HIG+ R  + FD++ R LR  Y   
Sbjct: 2   LKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLR--YRGY 59

Query: 65  HVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPTVEPR 124
            V Y RNITD+DDKI  RA  +       ++  ++T++   + H D  AL  ++P+ EPR
Sbjct: 60  EVNYQRNITDVDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMVRPSFEPR 113

Query: 125 ATDYIAEMIYLIERLIERGHAYKAG-GEVLFDTRSMADYGQLSKRPLDEQQAGARVAVEA 183
           AT +I E+I ++ RL++RGHAY A  G+VLFD  S A YG+LS + L++ QAGARV V+ 
Sbjct: 114 ATLHIDEIIDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDE 173

Query: 184 HKKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDLIFP 243
           +K+NP DFVLWK+S   EP W+SPWG GRPGWHIECSAM  ++LG  FDIHGGG DL FP
Sbjct: 174 NKRNPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGRQWP 303
           HHENEIAQS CAH T  + N WMH G V V+  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTPYV-NTWMHTGMVMVDREKMSKSLGNFFTIRDVL-------AHYD 285

Query: 304 GEVLRLAMLMTHYREPIDFSVKRLEEAERLLSKWPAA------ETSDAAADETV---LEA 354
            + +R  +L  HYR  +++S   L++A   L +   A          A ADE V   + A
Sbjct: 286 AQTVRYFLLSGHYRSQLNYSEDNLKQARASLERMYTALKGLDLTVEAAGADEFVSRFMAA 345

Query: 355 LADDLNTVAAVQALHALAHAANTDPSRLPAFAAS--------AALLGVLPKKTE------ 400
           + DD NT  A   L  +    N   +   A A+         A +LG+L    E      
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKTSDMAAASQLGVALKELAEVLGILSSTPEAFLQGE 405

Query: 401 --MDEAIVSAVDALVELRLEMLKAKNFAEADRLRDELSEKGIQLKDGKDKETGERTTTWE 458
              DE  V+ ++AL+  R      K++  AD  RD L+  G+ L+DG +       TTW 
Sbjct: 406 GNADE--VAEIEALIVERNRARAEKDWPAADVARDRLNALGVVLEDGPE------GTTWR 457

Query: 459 LK 460
            K
Sbjct: 458 KK 459