Pairwise Alignments

Query, 461 a.a., cysteinyl-tRNA synthetase from Agrobacterium fabrum C58

Subject, 458 a.a., cysteinyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  436 bits (1120), Expect = e-126
 Identities = 236/452 (52%), Positives = 293/452 (64%), Gaps = 29/452 (6%)

Query: 5   LKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGED 64
           LKL NT TR K  F PID DNVRMYVCGPTVYD AH+GNARP +VFD+LFR+LR VYG +
Sbjct: 6   LKLTNTKTRRKEVFTPIDPDNVRMYVCGPTVYDRAHLGNARPAVVFDMLFRVLREVYGPE 65

Query: 65  HVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPTVEPR 124
           HVTY RNITD+DDKINARA           +I  +T +T   + +D+AALG L PT  PR
Sbjct: 66  HVTYVRNITDVDDKINARAAET------GRSIREITDETTGWYLEDMAALGTLPPTHVPR 119

Query: 125 ATDYIAEMIYLIERLIERGHAYKAGGEVLFDTRSMADYGQLSKRPLDEQQAGARVAVEAH 184
           AT+YI +M+ +IE LI RGHAY A G VLFD RS   YG LS R +D+  AGARV V  +
Sbjct: 120 ATEYIPQMVAMIETLIARGHAYVAEGHVLFDVRSYGAYGALSGRSVDDMIAGARVEVAPY 179

Query: 185 KKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDLIFPH 244
           K++P DFVLWK S    PGW+SPWG GRPGWHIECSAM+   LGE FDIHGGG DL FPH
Sbjct: 180 KRDPMDFVLWKPSEAGLPGWDSPWGRGRPGWHIECSAMSHELLGESFDIHGGGNDLQFPH 239

Query: 245 HENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGRQWPG 304
           HENEIAQS CAH     A VWMHN  +QVEG+KMSKS GNF T+ +LL       +  PG
Sbjct: 240 HENEIAQSCCAHPEGGFAKVWMHNEMLQVEGKKMSKSLGNFFTVRDLL------DQGVPG 293

Query: 305 EVLRLAMLMTHYREPIDFSVKRLEEAERLLSKWPAAETSD---AAADETVLEALADDLNT 361
           EV+R   L THY +P+D++ ++ +EA  +L KW AA        AA  +V+ AL DDLNT
Sbjct: 294 EVIRFVFLGTHYSKPMDWTERKRDEAMAVLRKWRAAVAGTRPAPAAAPSVMAALVDDLNT 353

Query: 362 VAAVQALHALAHAANTDPSRLPAFAASAALLGVL-------PKKTEMDEAIVSAVDALVE 414
             A+  LH L    N     LP   ASA L+G+L           ++D + ++A   L E
Sbjct: 354 PGAIAELHQLYRDGN-----LPGLLASAQLMGLLSDEMGGWDSSPQVDLSELAA--RLAE 406

Query: 415 LRLEMLKAKNFAEADRLRDELSEKGIQLKDGK 446
           +R   +  K+F + DR++  L   G++++  K
Sbjct: 407 VREAAIGTKDFTQVDRMKAALIAAGVEVRMSK 438