Pairwise Alignments

Query, 461 a.a., cysteinyl-tRNA synthetase from Agrobacterium fabrum C58

Subject, 461 a.a., cysteinyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  347 bits (890), Expect = e-100
 Identities = 209/480 (43%), Positives = 280/480 (58%), Gaps = 46/480 (9%)

Query: 5   LKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGED 64
           LK++N++TR+K EF PI    V MYVCG TVYD  HIG+ R  + FD++ R LR  Y   
Sbjct: 4   LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLR--YAGY 61

Query: 65  HVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPTVEPR 124
            V + RNITD+DDKI  RA  +       +  + +T +   + H D  AL  ++P  EPR
Sbjct: 62  EVNFQRNITDIDDKIIKRANEN------QEDCNTLTDRLIGEMHKDFDALNMIRPDFEPR 115

Query: 125 ATDYIAEMIYLIERLIERGHAYKAG-GEVLFDTRSMADYGQLSKRPLDEQQAGARVAVEA 183
           AT +IAE+I ++ERL+ RGHAY A  G+VLF   S  +YG+LS + L++ QAGARV V+ 
Sbjct: 116 ATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDD 175

Query: 184 HKKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDLIFP 243
           +K+NP DFVLWK+S   EP WESPWG GRPGWHIECSAM  ++LG  FDIHGGG DL FP
Sbjct: 176 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 235

Query: 244 HHENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGRQWP 303
           HHENEIAQS CAH T  + N WMH G V V+  KMSKS GNF TI ++L         + 
Sbjct: 236 HHENEIAQSCCAHDTPYV-NYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 287

Query: 304 GEVLRLAMLMTHYREPIDFSVKRLEEAERLLSKWPAA------ETSDAAADETVLE---A 354
            E +R  +L  HYR  I++S + L++A   L +   A        + A A+E V +   A
Sbjct: 288 AETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVTAAPAEEFVAKFKAA 347

Query: 355 LADDLNTVAAVQALHALAHAAN----TDPSRLPAFAAS----AALLGVLPK------KTE 400
           + DD NT  A   L  +    N    TD ++  A A +    A +LG+L +      K E
Sbjct: 348 MDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKGE 407

Query: 401 MDEAIVSAVDALVELRLEMLKAKNFAEADRLRDELSEKGIQLKDGKDKETGERTTTWELK 460
             +  V+ ++AL+  R      K++  AD  R+ L+E G+ L+DG         TTW  K
Sbjct: 408 GSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLEDGPS------GTTWRKK 461