Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (533), Expect = 5e-59
 Identities = 107/288 (37%), Positives = 166/288 (57%), Gaps = 8/288 (2%)

Query: 14  DSARGFAFALSAYLLWGFLPFYMKAVAHISPIEVIVHRVIWSVPIAAVVLIALGRTAEIR 73
           D+ +G   A+SAY +WG  P Y KA+  +S +E++ HRV+WS  + AV++    R   + 
Sbjct: 9   DAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVV 68

Query: 74  TALRNPKMLAMASLTAALISINWGVYIWSIGAGRALDAALGYFINPLFSIFLGAVLLKEK 133
             +  P+   +  +TA L+  NW ++IWSI A   LDA+LGY+INPL ++ LG + L E+
Sbjct: 69  GVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGER 128

Query: 134 LYPAQIAAICLVGLAVAILTWHAGSLPWVSIALTVSWGFYAFFRKTLPIGATQGFLLEVM 193
           L   Q  A+ L  + V I     GS+P V+IAL  S+GFY   RK + + A  G  LE +
Sbjct: 129 LRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETL 188

Query: 194 LLSIPAVLVMIWLAFSGQAHFMGGNSADTW----LLAASGVITAVPLILYGNGAKLLRLS 249
            +   A + +IWLA +  +      + +TW    LL  +GV+T +PL+ +   A  L+LS
Sbjct: 189 FMLPAAAIYLIWLADTPTSDM----ALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLS 244

Query: 250 TIGIMQYIAPTMIFLIAIFIFKEPFDMVRMAAFAMIWVALAIYTGSSL 297
           T+G  QYI P+++FL+A+ ++ E F   +   FA IW AL I++   L
Sbjct: 245 TLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGL 292