Pairwise Alignments

Query, 628 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  259 bits (663), Expect = 2e-73
 Identities = 158/429 (36%), Positives = 234/429 (54%), Gaps = 27/429 (6%)

Query: 188 VLVTVVTVWAYIWFTVRASNWRIGIRRAMNDSDTDANTKA------IDSLLNFETVKYFG 241
           +LV  + VW   +  ++       + R    S   AN ++      +D+  N  TVK F 
Sbjct: 185 ILVVPILVWLLFYIAIQV----YFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFS 240

Query: 242 NEEMEARRFDVAMERYEKSAISIWTSLGWLNFGQGVIFGIGSTIMMVMSALAVQRGEQTI 301
           + + E       M+++  +      +L  L +   +I      ++  ++AL++Q     +
Sbjct: 241 HSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLI---NYLLLFSIAALSIQLW---L 294

Query: 302 GDFVFVNALLLQLSVPLNFIG---FVYREIRQGLTDIEQMFDLLEVEA---EVTDRPDAK 355
            + V V  + + +++ L   G   ++  EIR     +  + D +   A   E+ DRP AK
Sbjct: 295 AETVTVGVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAK 354

Query: 356 PLAAGPGAISFRDVHFAYDPERPILKGVSFDVPAGKTVAIVGPSGAGKSTISRLLYRFYD 415
            L    G +SF  V F Y  ++ +   ++  + AG+ V IVG SGAGKST+  LL RFYD
Sbjct: 355 SLQVKFGELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYD 414

Query: 416 IQEGAVTIDGQDIRDVTQKSLRSMIGMVPQDTVLFNDTLAYNIRYGRPSATDEELKAAAD 475
           +Q G + IDGQDI  V+Q+SLR  IGM+ QDT L + ++  NI YG P A    ++ AA 
Sbjct: 415 VQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAAR 474

Query: 476 AAQISAFIGKLPD-----GYATMVGERGLKLSGGEKQRVAIARTILKAPPILILDEATSA 530
            A    FI +L D     GY   VGERG+KLSGG++QR+AIAR +LK  PILI+DEATSA
Sbjct: 475 QAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSA 534

Query: 531 LDTHTEQEIQSALDIVSKNRTTLVIAHRLSTVIHADEIIVLKEGLIAERGTHASLMAHDG 590
           LD+  E  IQ  L  +   +T + IAHRLST+   D +IV+ EG I E+GTH  L+AH G
Sbjct: 535 LDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKG 594

Query: 591 LYASMWSRQ 599
           +YA +W+ Q
Sbjct: 595 IYAQLWAHQ 603