Pairwise Alignments

Query, 430 a.a., two component response regulator from Agrobacterium fabrum C58

Subject, 544 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  128 bits (322), Expect = 4e-34
 Identities = 110/421 (26%), Positives = 179/421 (42%), Gaps = 16/421 (3%)

Query: 5   ILLIEDSVALSMLLRTRLSDETEAEVVHCASMAEADALMQANNFTLALTGLNLPDAPKGE 64
           I +IED   +  ++  +L  E    V H  +  +   +  A+ F L L  L LPD  +  
Sbjct: 132 IAIIEDDNNVGAMITKQLH-EFGFNVQHFLNFTDFIKVQYASPFDLILLDLILPDYTEDA 190

Query: 65  ILTLLSE---RKVPAIVFTATVDEEARKRYAEKKIIDYIVKDGHRTVDAVVKTVD---RI 118
           +     E         V ++  D + R       + +Y VK    T+  +V+ +    ++
Sbjct: 191 LFEAACEFEKNNTRVFVLSSRSDFDMRLLAIRANVSEYFVKPAETTL--LVRKIHQWLKM 248

Query: 119 MTNKRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILSQ-DPSIQLVITDYH 177
                  VL+VDD ++       +L      V       + +  L Q +P   L I D +
Sbjct: 249 SDKPPLKVLLVDDQQSMVDYFSSLLRSHGLMVRGMTKPEQVIPTLEQFEPD--LFIFDLY 306

Query: 178 MPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYRPFVPEELQCR 237
           MP ++G EL R IR         ++ +SS        S ++AG+ D + +   P     +
Sbjct: 307 MPGVNGLELARMIRQLDKYTSSPILVLSSDDTMQNKVSIIQAGSDDLISKQTAPSLFVTQ 366

Query: 238 IDNNIETLKQLKRLRELAERDHLTGLPNRRSFFERTRALMDVINDNDESGAVAILDIDHF 297
           +   I   ++   +R  A RD LTGL N        R  +++    + S  +A+LD+DHF
Sbjct: 367 V---ISRAQRGHDIRSSASRDSLTGLLNHTQILVAARHCINLAKRANSSVCIAMLDLDHF 423

Query: 298 KKINDTLGHDAGDRALKKLAELLQGMCDEQRHIPARLGGEEFAVFLRGLDARAAYAFCEE 357
           K++NDT GH  GD+ L   A LLQ           R GGEEF + +  + A    A    
Sbjct: 424 KQVNDTYGHSGGDKVLLAFAHLLQQSL-RAADFMGRYGGEEFMLVIPDMPAPLVIAKVNA 482

Query: 358 LREQVEKNGRQLSGSSLALTISLGVVEIEKGEPFDNQLNAADQLLYLAKANGRNRVYSDI 417
           +RE          G+   +T+S G+    +   F   L  AD+ LY AK  GRNR+ + +
Sbjct: 483 IRESFSNIVFVEEGAEFKVTLSGGLAFSTECHEFQECLLLADKNLYEAKRTGRNRIINTL 542

Query: 418 M 418
           +
Sbjct: 543 V 543