Pairwise Alignments

Query, 273 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

 Score =  159 bits (402), Expect = 6e-44
 Identities = 88/249 (35%), Positives = 141/249 (56%), Gaps = 1/249 (0%)

Query: 20  SALAVQYSFSVIGALLLLIIGWLAAAFLQRWAFQGLSRIRGFDATLAGFFAGGIRYVVLI 79
           S L +QY  +VI A+L+L IG L    +       L + +  D  +  F  G +RY + I
Sbjct: 27  SDLLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKK-KEMDKAVVDFIHGLVRYTLFI 85

Query: 80  LVIVMVLGQFGVQTASILAALGAAGLAIGLALQGTLQNIAAGIMLLVLRPFRVGEYIETS 139
           +V++  L + GVQTAS++A +GAAGLA+GLALQG+L N AAG++++  RPF+ G+Y+E  
Sbjct: 86  IVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIG 145

Query: 140 TVSGTIIEIGLFATELKTSDGLYRLAPNSTLWNVPITNYSRFPSRRHELSLTVKNDEDMA 199
            V+G++  I +F T LK+ D    + PNS +    ITNYSR  +RR ++ + V    D+ 
Sbjct: 146 GVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDLQ 205

Query: 200 AAQDMLMTVVRSESRILLDPAPVTFVDSVTADSATVKLRYWVRSDNYFVTTRDVTKAMRL 259
             + +L   +  + RIL DP     V ++   S    +R W ++ +Y+    D  +A++ 
Sbjct: 206 KTKRVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSMQAIKE 265

Query: 260 AFDERKAEV 268
           A D    E+
Sbjct: 266 ALDANGIEI 274