Pairwise Alignments

Query, 313 a.a., GTP-binding protein, Era family from Agrobacterium fabrum C58

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 7e-18
 Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)

Query: 23  VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGIFKPR 82
           VAL+G  N GKSTL NRL   + ++V+     TR    G A     + + +DT GI    
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64

Query: 83  RRLDRAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGLKDVPQKKILCLNKIDQVK 142
             ++  M   +     +AD++L ++D   GL    EAI + L+ + +  IL +NK+D + 
Sbjct: 65  EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGID 124

Query: 143 REDLLKLAAAANEKVAFDRTFMISATNGSGCEDLMDYLVETLPE 186
            +     A+A   ++  D+ + I+A +G G   L+D ++    E
Sbjct: 125 AD----AASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAE 164



 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 6/166 (3%)

Query: 23  VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGIFKPR 82
           +A+IG  N GKSTL NR++G +  +V     TTR  +         + V +DT G+ + +
Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267

Query: 83  R---RLDRAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGLKDVPQKKILCLNKID 139
           R    +++  V       +DA+++LL++D+   +     ++L    +  +  ++ +NK D
Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWD 327

Query: 140 QVK---REDLLKLAAAANEKVAFDRTFMISATNGSGCEDLMDYLVE 182
            +    +E + K        V F R   ISA +G+G   L + + E
Sbjct: 328 GLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373