Pairwise Alignments

Query, 247 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 195 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 56.6 bits (135), Expect = 4e-13
 Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 5/130 (3%)

Query: 25  LAVVSLSGGPLGAASCRTDAMAGIDWRECNKRMLMLGSSNLDSAMLYGTDFTYTDLRGSS 84
           L+ V L    L  A      + G D R    R  +L  ++   A L G D   +DL  + 
Sbjct: 36  LSFVDLVNVDLERADLTGAILVGADLRRAWLRGAILREADCSGANLLGADLLRSDLCRAQ 95

Query: 85  LKGANLEKAKLIRTALGEAN-----LQGANLTKVEAYRSDFSAADATNAKFVNAEMQRTK 139
           L G+NL +A L  + L EAN     LQ A+L +   YR+DF+AAD   A   +A +    
Sbjct: 96  LVGSNLRRAMLNDSILAEANCRQACLQQADLVRAILYRTDFTAADLHEADLSHAFIYDVN 155

Query: 140 FEKTKLDGTD 149
           F    L  TD
Sbjct: 156 FTSVDLSHTD 165



 Score = 50.4 bits (119), Expect = 3e-11
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 50  WRECNKRMLM-LGSSNLDSAMLYGTDFTYTDLRGSSLKGANLEKAKLIRTALGEANLQGA 108
           WR  N  ++  L  ++L    L   D    DL G+ L GA+L +A L    L EA+  GA
Sbjct: 20  WRSQNPTVIPDLRQADLSFVDLVNVDLERADLTGAILVGADLRRAWLRGAILREADCSGA 79

Query: 109 NLTKVEAYRSDFSAADATNAKFVNAEMQRTKFEKTKLDGTDFTKAELGRADFEGASLNGS 168
           NL   +  RSD        A+ V + ++R     + L   +  +A L +AD   A L  +
Sbjct: 80  NLLGADLLRSDL-----CRAQLVGSNLRRAMLNDSILAEANCRQACLQQADLVRAILYRT 134

Query: 169 KFSLTNLSRARFGGATLGGPVDFTSAFLLLTRIEGVDLS 207
            F+  +L  A           D + AF+       VDLS
Sbjct: 135 DFTAADLHEA-----------DLSHAFIYDVNFTSVDLS 162



 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 32/110 (29%), Positives = 49/110 (44%)

Query: 18  AVAAGVVLAVVSLSGGPLGAASCRTDAMAGIDWRECNKRMLMLGSSNLDSAMLYGTDFTY 77
           A+  G  L    L G  L  A C    + G D    +     L  SNL  AML  +    
Sbjct: 54  AILVGADLRRAWLRGAILREADCSGANLLGADLLRSDLCRAQLVGSNLRRAMLNDSILAE 113

Query: 78  TDLRGSSLKGANLEKAKLIRTALGEANLQGANLTKVEAYRSDFSAADATN 127
            + R + L+ A+L +A L RT    A+L  A+L+    Y  +F++ D ++
Sbjct: 114 ANCRQACLQQADLVRAILYRTDFTAADLHEADLSHAFIYDVNFTSVDLSH 163