Pairwise Alignments

Query, 778 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (388), Expect = 4e-41
 Identities = 105/303 (34%), Positives = 166/303 (54%), Gaps = 37/303 (12%)

Query: 475 TRDGGLVSVGTDITLLKRHQERLRDSERRLMATIGDLSASQHKLERQKTELSDANANYLA 534
           ++ G  ++V   +T L          ++ +M  +G       +L+R++ EL+DA      
Sbjct: 481 SKSGARITVKLSVTTLY-------GEDKDIMGYLGIAYDLTEQLKREQ-ELADA------ 526

Query: 535 EKERAQAANRAKSEFLANMSHELRTPLNAILGFSEI-LQNEMFGPVGSPKYSEYARDIHD 593
            +E+A  A+RAKS+FLANMSHE+RTP+NA+LG  ++ LQ E+      P+  +Y      
Sbjct: 527 -REQALQASRAKSDFLANMSHEIRTPMNAVLGLLQMTLQTEL-----PPRPRDYLEKTQQ 580

Query: 594 SGKHLLNVINDILDMSKIEAGHMRINRETIDLAPLIEETLRLTAIQAEQKNITVQQKVCA 653
           + K LL ++NDILD SKIEAG + + R+   L  L+ +   + + Q +QK+I +  +V  
Sbjct: 581 AAKSLLALLNDILDFSKIEAGRIELERQGFSLQQLLGDMGSILSSQVQQKDIELVYQVAP 640

Query: 654 GLTMQ--GDRRAMKQIMLNILSNAVKFTGDGGRIAL---------RTHVHEAAMILTIAD 702
            +  Q  GD   ++QI+LN+L+NA+KFT  G  I             H+H     + I D
Sbjct: 641 SVPDQLIGDSLRLRQILLNVLTNAIKFTEKGDIITRIDADLGDDGTCHLH-----IEIQD 695

Query: 703 TGIGIPAQALQKIGQPFEQVQSQYAKSQGGSGLGLAISRSLVKLHGGTMKIRSCEGRGTV 762
           +GIG+  +    I + F Q  S  ++  GG+GLGLAI+R LV L  G +++ S  G G+ 
Sbjct: 696 SGIGMTNEQQAIIFKGFSQADSSISRRYGGTGLGLAITRELVHLMQGEIRVTSSPGVGST 755

Query: 763 VTI 765
            TI
Sbjct: 756 FTI 758