Pairwise Alignments

Query, 757 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (434), Expect = 1e-46
 Identities = 105/266 (39%), Positives = 154/266 (57%), Gaps = 8/266 (3%)

Query: 132 GNTIGHRGIIHEDSVPIDQMPDHFIKAVLATEDRRFFDHFGIDFIGLARAMSENARAGGV 191
           G  I   G      + +++MP   I+AV+ATED R+++H+G D IG+ RA      +G  
Sbjct: 65  GKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSA 124

Query: 192 VQGGSTLTQQLAKNLFLTNERSLERKIKEAFLALWLESNMSKKEILSLYLDRAYMGGGTF 251
            QG ST+TQQLA+N FL+NE+ + RK+KE F+A+ +E  +SK+EIL LYL++ Y+G  ++
Sbjct: 125 SQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSY 184

Query: 252 GAAAAAQFYFGKNLTDVTLSESAILAGLFKAPAKYAPHVNLPAARARANTVLSNLVQSGL 311
           G  AAAQ YFGK + D+TL E A++AGL KAP+   P  ++  A  R N VL  ++    
Sbjct: 185 GVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKY 244

Query: 312 MTEGQVIGARRNPATVI---DRADVKAPDYFLDWAFD-EVQRLAAEGKFKDHTVVVRTTI 367
           +T+ +   AR  P          ++ AP Y  + A    V+R   E  +    + V TT+
Sbjct: 245 ITKAEYDAARAEPVLPKYHGAEIELNAP-YVAEIARAWMVERYGEEAAYTS-GMNVYTTV 302

Query: 368 DTGLQQAAEQAMEMELREYGE--GYR 391
           D+ LQ+AA QA    L  Y E  GYR
Sbjct: 303 DSKLQRAANQAAINNLLAYDERHGYR 328



 Score =  110 bits (275), Expect = 3e-28
 Identities = 86/284 (30%), Positives = 130/284 (45%), Gaps = 39/284 (13%)

Query: 397 MVMIENGGGVRAMVGGRDYGESQFNRATAALRQPGSSFKVYTYSAAMEKGMKPDTLISDA 456
           + M    G V A+VGG ++  ++FNRAT ++RQ GSS K + YSAA+ KG+   TLI+DA
Sbjct: 446 VAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLINDA 505

Query: 457 PVT-W-----RGWSPQNYGRSYAGKVTLQVALAKSYNTVPVRLAKDVLGTQVIVDTAKAM 510
           P+  W       W P+N   +Y G   L++ LA+S N + VR+ ++V G     +     
Sbjct: 506 PINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREV-GLDETREYLTRF 564

Query: 511 GV-ATPLRSDKTIPLGTSEVTVLDQATAYAVFPADGMQSRRHGIEQVMDYEGNV------ 563
           G     L   +TI LG   +T +  A  ++VF  +G       I +V +  GN+      
Sbjct: 565 GFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEP 624

Query: 564 -----------LYDFSHDE---PPAKRVLSEEANSKMNQMLVT-----------IPVMGT 598
                      L +F+  +   P A +V+SE+      +ML +               GT
Sbjct: 625 KVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGT 684

Query: 599 ARRGALDNGIVSGGKTGTSQAYRDAWYVGFTGNYTTAVWFGNDE 642
             R         GGKTGT+   +DAWY G+        W G D+
Sbjct: 685 GWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDD 728