Pairwise Alignments

Query, 222 a.a., Hemolysin III from Agrobacterium fabrum C58

Subject, 236 a.a., hemolysin III family channel protein (RefSeq) from Shewanella loihica PV-4

 Score =  117 bits (293), Expect = 2e-31
 Identities = 69/204 (33%), Positives = 112/204 (54%), Gaps = 6/204 (2%)

Query: 11  YDFYEIVADGIVHGVGIVFALIGATALIFYA-MAWGSLS--AIAAAWIYGLGLVACLSVS 67
           Y   E +A+ + HG+G++    G  AL F     W  L+   +    +Y L ++     S
Sbjct: 31  YSRAEELANALSHGLGVI---AGILALAFSLHKGWDRLTNLQLGGLALYCLSIILLFLCS 87

Query: 68  FTYNIWPHSRVKWFLRRLDHSAIFILIAATYTPFLMRGIHDPLIAVMLGLIWLAAICGIL 127
             Y+     ++K  L+  DH AI++LIA TYTP +   +       +L  IW  A+ GIL
Sbjct: 88  TLYHSVSAPKLKHKLKIADHCAIYLLIAGTYTPLMQILLDSVEADAILIAIWSLALGGIL 147

Query: 128 LKCLFPGRYDRVAIGLYLAMGWSGIMVVEPLSSHLAPVTLWLIVAGGVIYSLGVIFHVWE 187
            K LF  R+   ++ LYL MGW  ++V++ L + + P+   L++AGG+ YS GVIF+V +
Sbjct: 148 FKTLFIHRFKIFSLVLYLVMGWLCVIVMKQLLAAMTPLGFQLLLAGGIFYSTGVIFYVGK 207

Query: 188 KLRFQNAIWHGFVVSAAAVHYFAV 211
           ++ + +AIWH FV++ A  H+  V
Sbjct: 208 RIPYNHAIWHLFVLAGALSHFLCV 231