Pairwise Alignments

Query, 386 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 369 a.a., AI-2E family transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 76/322 (23%), Positives = 145/322 (45%), Gaps = 30/322 (9%)

Query: 57  IFLIMSMAVIHELSM-ILMPVVMAVVVGMIL---GISAEKLASY--GIPGAGVALILSTL 110
           +F ++S+  I  L   +L P++ + ++ ++L   G   E+   +   +      +++  +
Sbjct: 15  LFCLISLTYIAILGQSLLAPLLFSFLMAILLLPVGNFLERRLKFKRSLSTIVSVILMIAV 74

Query: 111 VAAVIFFVVNSLIDPVSQLATEGPALIERSIDRFLPYVQNLRWLNISAATFSMGSM---- 166
           +  +I+F  N L D    L  + P L E++    + Y +  +W++ +    S   +    
Sbjct: 75  IGGIIYFFGNQLSD----LWADWPLLKEKAN---VSYHELQKWISHTFGVNSQKQLDYLN 127

Query: 167 -SMESLISRSGEIITLLGANVTPAIVQGLIFLAALLMFLYSRLRLRKALIM----VFPAR 221
            S E  ++ S  I+    A     +   L+FL   L+F +  L  R+ L      VF   
Sbjct: 128 DSTEKALATSAAIV----ATTLATLSSTLLFLGFTLLFTFFILNYRRVLFTFLTSVFREE 183

Query: 222 HQRLRTIRIIGSVEKVLGTYFATASLIYAALGVTMIVIAYVGGLSMPLLWGLFAFLSSFV 281
           H+  +   I+  ++ ++  Y     L    + V MI++  + G+   +L GL A + + V
Sbjct: 184 HKE-KVSEIVSQIQYIIKKYIIGLFLQMLIVTVLMIIVLSLLGVKYAVLLGLVAGIFNVV 242

Query: 282 PFLGITL-MTISLTIAGIIAHDNMILALLPAGVFFTIHLLMENLAFPAVVGRNMEINPFL 340
           P+LGI   + IS  I    A    +L +L A  F  +H +  N+  P VVG  ++IN   
Sbjct: 243 PYLGIFFALLISCLITFATAGAGKVLLVLIA--FVGVHAIDGNVLMPLVVGSKVKINALF 300

Query: 341 VFVMIIFWTWMWGAAGAMLALP 362
            F+ I+    +WG +G  L +P
Sbjct: 301 AFIGIVVGEMIWGISGMFLCIP 322