Pairwise Alignments

Query, 699 a.a., protease II from Agrobacterium fabrum C58

Subject, 665 a.a., S9 family peptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  235 bits (599), Expect = 6e-66
 Identities = 195/668 (29%), Positives = 301/668 (45%), Gaps = 41/668 (6%)

Query: 30  DYAWFRADNWQAMFKDPTLLDPAIRAHLEAENAYMEAAMGDTRALQEKLFEEMKGRIKQD 89
           DY W R D+           +PA++  L   N   +      + L ++L  E +   +  
Sbjct: 23  DYQWLRDDSRS---------EPAVKQFLAEHNRKTDHWFAPAKPLVQELVNEWQQTSQHK 73

Query: 90  DSSVPVNDGPYAYGTLFVTGGEQPHYFRTPRDGGDKHVLLDGDKEAQGKDYFRLAGLNQS 149
                +      Y  +   G    H  +    G     LL+    A+  DY++LA  +  
Sbjct: 74  APPPALIYANQQYNDIQWNGHR--HIVKIGAQG-QIEPLLNLSARAEPFDYYQLASWSLD 130

Query: 150 SDHSHGIWGYDDKGSEYFTLRIRNLETGEDLADVVENTGGGGAWAPDGKSFFYTLQDENH 209
                     D +G E F L I  L    +   V E      AWA DGKS +Y L D N 
Sbjct: 131 RSVQSVALAEDTRGDEQFKLTIVRLADRTEQI-VSETASTYFAWAADGKSLYY-LSDLNG 188

Query: 210 RPSKVFHHIIGEPQSADRLVYEEKDPGFFMGVGASVLDDFIFIDIHDHETSEYRILSTKD 269
             S        E   + RL  E +   +   + ++    ++ +  ++  +++ R+L T+ 
Sbjct: 189 --STQLQRFELETGQSTRLA-EWRSAEWLFSLYSASNPRYLVVQQNNENSTQQRLLDTQT 245

Query: 270 LTAEPKVVAEREEGIEYSMCEGGDVFFILTNDGDAKDFRIMEAPVTAPGKENWKEVVPHE 329
               P +    E G+EY     G+  +I +N   A  FR+   P+    K++W+ V  H+
Sbjct: 246 GELMPWL-RTTEPGLEYYADVLGETLYINSNHQGA--FRLYRQPLHT--KQDWQSVTTHK 300

Query: 330 PGRLILSVDAYARHLIWLERRDGLPRIVIRDRRTGEEHSIAFAEEAYSLGLHGAAEYDTD 389
               + +   +   ++ +E +   P++ + D +          +      +    +  ++
Sbjct: 301 EIGSLSNFYLFDAGIVLVENQTLAPKVWVLDSQGEVRTHFELRDLGQVAWISRNGDAVSN 360

Query: 390 VIRFSYSSMTTPSQLFDYNMVTRDRTLLKTQEVPSGH----NPDDYITRRIMAPAHDGEL 445
            +R    SMT P+   + ++       L+ Q++   H    +P  Y T+ +         
Sbjct: 361 RLRVRTMSMTEPASWHELDVAQ-----LQWQQLSQDHYADFDPKQYQTQTVWV-TQGAIQ 414

Query: 446 VPVSLLYRKDVPLDGSAPCLLYGYGAYGITIPASFSTTTLSLADRGFIYAIAHIRGGKDK 505
           VPV+L YR D  L  ++  +LYGYGAYG+T+   F    +SL DRG IYAIAH+RGG   
Sbjct: 415 VPVTLAYRSD-KLTPNSSVVLYGYGAYGVTMKPYFMPQIVSLLDRGMIYAIAHVRGGGYL 473

Query: 506 GFEWYETGKMENKQNTFKDFIAAADHLV--QEGFTSYEGIIAEGGSAGGMLMGAVANMAP 563
           G  W++ G   NKQN   DF+AAA +L   Q+G      I   GGSAGG L+ A  N  P
Sbjct: 474 GEAWHQAGAGLNKQNGIDDFLAAARYLTHFQQG---ERAIYTIGGSAGGTLVAAALNQQP 530

Query: 564 EKFAGIIAAVPFVDVLTTMLDDTLPLTPPEWPEWGNPLESEEEYGWIAAYSPYDNVGEKS 623
             FAG +  VPFVDVL +M D +  LT  ++ EWGNP + E+    + AY P  N+    
Sbjct: 531 NLFAGAVLQVPFVDVLASMSDTSQALTAQQYQEWGNPQQPEQRQ-VMQAYDPLSNLRAAP 589

Query: 624 YPPLLALSGLTDPRVTYWEPTKWVAKLREKTTGEAPILLKTNMAAGHGGKSGRFQRLEEV 683
           YPP L   G  D RV YWE  +++A+L + + G  P LL T+  AGH   S R Q LE+ 
Sbjct: 590 YPPTLVNVGWWDNRVPYWEGARYLARLSDVSQGAGPYLLSTDFQAGHA--SDRRQALEKQ 647

Query: 684 AFEYAFAL 691
           A EYAF L
Sbjct: 648 AREYAFFL 655