Pairwise Alignments

Query, 302 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 93.2 bits (230), Expect = 5e-24
 Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 2/179 (1%)

Query: 111 LSIVTIATLIAIVIGLPLGILMGRSERLQ--RLINPVLDVMQTLPSFVYLIPVVVIFGIG 168
           L  V +AT+ A ++ + L I++ R    +   L   ++++ QT P    L   V I+G G
Sbjct: 55  LRTVFVATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIYGFG 114

Query: 169 KVPGLIAVVIYAIPPVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALPTIMT 228
           + P LIA+ +Y + P+      G+  +   V+EAA   G +  Q+LF ++LPLALP I+T
Sbjct: 115 EKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPVILT 174

Query: 229 GINQTIMMALAMVVVASMVGVGGLGKNVLQAINNQFFTVGFLNGFALVAIAIMFDRASQ 287
           GI  +++++LA   + S V    LG+ ++  + +         G  + A+A++   A Q
Sbjct: 175 GIRLSVVISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVLIHDALQ 233