Pairwise Alignments

Query, 365 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  286 bits (731), Expect = 8e-82
 Identities = 159/329 (48%), Positives = 223/329 (67%), Gaps = 7/329 (2%)

Query: 5   IEIKNLYKIFGKHPEKYLEAVRSGMDKVELNDKHNHVLGLNNINITMPGGKITVVMGLSG 64
           I++  LYKIFGK PEK    ++ G  + E+ +K   V+GL NIN  +  G+I V+MGLSG
Sbjct: 6   IQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLSG 65

Query: 65  SGKSTLIRHINRLIDPTAGEVLYD-GEDICGMSTSALRKFRRHKTAMVFQKFGLLPHRTV 123
           SGKSTLIR INRLI PT G+++ + G DI  MS   L + RR    MVFQKFGLLP+R+V
Sbjct: 66  SGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLLPNRSV 125

Query: 124 LENSVYGLDIQGVPRKESETKGRYWLNRVGLDGYEDYYPNQLSGGMQQRVGLARALANDA 183
           LEN   GL+IQG+  +E   K    L+ VGL G+E    ++LSGGMQQRVGLAR LA + 
Sbjct: 126 LENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGLAVNP 185

Query: 184 DILLMDEAYSALDPLIRVDMQTMLLDLQQELKKTVVFITHDLDEALRLGDHIAIL-KDGE 242
           +ILLMDE +SALDPLIR++MQ +LL +Q+++KKT++FITHDL+EA++LGD I IL ++G 
Sbjct: 186 EILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILNEEGS 245

Query: 243 VVQQGDGQSIILSPADGYVTDFVRDVNRSRVLQATTVMEPLDSKPEGMSVPENATLETIA 302
           +VQ    + I+L+P + +V  FV+DV+++ V++A    E L  KPE  ++      E   
Sbjct: 246 LVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRA----ESLVKKPE-FTLNNTIEKENAV 300

Query: 303 RDMSEANETQAHVVDEDGKPVGSIGLDTL 331
           + + E N   A+V+D+ GK +G +  + L
Sbjct: 301 KILGELNLDFAYVLDDSGKYIGVVNNEEL 329