Pairwise Alignments

Query, 453 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (374), Expect = 4e-40
 Identities = 105/378 (27%), Positives = 173/378 (45%), Gaps = 18/378 (4%)

Query: 70  LKELSGGWQRLAMLARAWITEPDVLLLDEPTNHLDLEKINVLESWLGELPRDTAVIIVSH 129
           L + SGGW+    LA+A I   D+LLLDEPTNHLDL+ +  LE WL   P    +I++SH
Sbjct: 147 LTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVMWLERWLQSYPG--TLILISH 204

Query: 130 DRAFLDNVTRTTLFLRPENSALFRLSYGHARAALEEEDAADERRFQRDMKTAQQLRRQAA 189
           DR FLD +    + +  +    +  +Y        ++    +  +Q+  K   Q+    +
Sbjct: 205 DRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQKMLQQQAIYQKQQK---QMAHMQS 261

Query: 190 KLNNIGINSGSDLLTIKTKQLRQRAEKIE--EKARPAHSDRSAGKIQLANRGTHAKVLMT 247
            ++     +       K +Q + R + +E  EK  PA  D      +          ++ 
Sbjct: 262 YIDRFRYKAS------KARQAQSRIKALERMEKVLPAQFDNPFS-FEFREPAALPNPILM 314

Query: 248 LEDVPVSTPDGTLLFRTGRQFIRQGDRIVILGRNGVGKTRLMSLLQAAVTAAGQIEDGIK 307
           ++ V     D  +L +     +  G RI +LGRNG GK+ L+ LL   +    Q  D   
Sbjct: 315 MDQVAAGYGDHLILEKIRLNLV-PGSRIGLLGRNGAGKSTLIKLLSGELKP--QSGDCTY 371

Query: 308 ATPSLVAGYVDQSLAEIDDDSTPAA-LLSRRFDIGDQRIHGLLAGAGIDMEMQKRRIATL 366
           +    +  +    L  +  + TP   ++    D  +  +   L   G   E    ++A  
Sbjct: 372 SQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNELELRNYLGSFGFHGEKALEKVAPF 431

Query: 367 SGGQKARLAMLALRLAEPNFYLLDEPTNHLDIDGQETLEAEIISREASCMLVSHDRSFVR 426
           SGG+KARL +  +   +PN  LLDEPTNHLD+D ++ L   + S E + ++VSHDR  +R
Sbjct: 432 SGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQSYEGAMVIVSHDRYLLR 491

Query: 427 TVGTRFWLIEKRKLVEVD 444
                 +L+   ++   D
Sbjct: 492 ATTDDLYLVHDHQVGPFD 509



 Score = 74.7 bits (182), Expect = 8e-18
 Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 29/214 (13%)

Query: 258 GTLLFRTGRQFIRQGDRIVILGRNGVGKTRLMSLLQAAVT---------AAGQIEDGIKA 308
           G  L       I  GD++ ++G+NG GK+ L +LL+  +T         A  ++    + 
Sbjct: 13  GKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSKPAHWELAWVAQE 72

Query: 309 TPSLVAGYVDQSL---------------AEIDDDSTPAALLSRRFD-IGDQRIHG----L 348
           TP+L    ++  +               AE  D+ T  A L  + + +G   I      L
Sbjct: 73  TPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMVGGYSIRARASEL 132

Query: 349 LAGAGIDMEMQKRRIATLSGGQKARLAMLALRLAEPNFYLLDEPTNHLDIDGQETLEAEI 408
           L G G   E     +   SGG + RL +    +   +  LLDEPTNHLD+D    LE  +
Sbjct: 133 LDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVMWLERWL 192

Query: 409 ISREASCMLVSHDRSFVRTVGTRFWLIEKRKLVE 442
            S   + +L+SHDR F+  +  R   IE + L E
Sbjct: 193 QSYPGTLILISHDRDFLDPIVNRIVHIENQTLNE 226



 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 4/152 (2%)

Query: 69  RLKELSGGWQRLAMLARAWITEPDVLLLDEPTNHLDLEKINVLESWLGELPRDTAVIIVS 128
           ++   SGG +   +LA     +P++LLLDEPTNHLDL+    L   L     + A++IVS
Sbjct: 427 KVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALT--LALQSYEGAMVIVS 484

Query: 129 HDRAFLDNVTRTTLFLRPENSALFRLSYGHARAALEEEDAADERRFQRDMKTAQQLRRQA 188
           HDR  L   T     +       F          L ++  A ER+  +   TA      A
Sbjct: 485 HDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQKA-ERKETQPTNTANSANSAA 543

Query: 189 AKLNNIGINSGSDLLTIK-TKQLRQRAEKIEE 219
           AK       +    LT    K+L Q  EK+++
Sbjct: 544 AKKEQKRREADFRKLTAPIRKKLTQLEEKLDK 575