Pairwise Alignments

Query, 905 a.a., P type cation (metal) transporter, ATPase component from Agrobacterium fabrum C58

Subject, 747 a.a., copper-translocating P-type ATPase (RefSeq) from Shewanella loihica PV-4

 Score =  320 bits (821), Expect = 2e-91
 Identities = 203/552 (36%), Positives = 302/552 (54%), Gaps = 25/552 (4%)

Query: 365 EEAAIVVLLFSVGELLEGFAAARARSGIKALGSLLPKTALVEENGSLRQIAADQVRIGQV 424
           E  A+++ L ++G  LE  A  +    IK L  L  KTA V  +G    I   QV  G  
Sbjct: 195 EATAMIIGLINLGLALEVKARGKTSEAIKRLIGLQAKTARVIRDGKELDIDIAQVLQGDK 254

Query: 425 VVARPGDRIAADGVVMEGQSSVDESPMTGESIPVAKEKGARVFAGSINHDGSLRIRVDRA 484
           V  RPG++I  DGVV+EG + VDES +TGE +PV K   + V  G++N  GS+     R 
Sbjct: 255 VRVRPGEKIPVDGVVIEGATMVDESMLTGEPMPVEKAIDSEVVTGTLNKSGSIVFSATRV 314

Query: 485 PEDNTIARIITLVEEAQDARAPTERFIQSFSRYYMPLIVAISALTIVVPPLVGLGDWDTW 544
            +D  +ARII +V+ AQ+++ P  R     + Y++P I+ I+ ++ +V      G   + 
Sbjct: 315 GKDTALARIIAMVKRAQNSKPPIGRLADVIASYFVPAIMIIAIVSAMV--WFNFGPEPSM 372

Query: 545 IY---RGLALLLIGCPCALVISVPAAIASSLSAAARHGMLVKGGAVIEMLARTETVAFDK 601
           ++       +L+I CPCAL ++ P ++   +  AA  G+L++ G  ++  ++   +  DK
Sbjct: 373 VFAIVSATTVLIIACPCALGLATPMSVMVGVGKAAESGVLIRNGEALQTASKISVMVLDK 432

Query: 602 TGTLTLGEPVVTDVVALDGN---EAELIAQAATIENESSHPLARAIVSHANKAGVIPLPG 658
           TGT+T G P VTDVV    +   E E++A AA IE  S HPLA AIV  AN  G+     
Sbjct: 433 TGTITQGSPQVTDVVVTQVSSCGEDEVLALAAGIERHSEHPLAEAIVETANSRGIQMEAV 492

Query: 659 SEIKAISGRGMQGNVGGKRLFIGAPRFATDVGTVSNELAERISALESEGKTVAVVMAEGV 718
            +  AISGRG++  + G+ L  G      D G  +     +   L +E KT   +  E  
Sbjct: 493 EDFNAISGRGVEAKLNGQTLLFGNQALMQDFGVDTQAYQAKAQQLAAEAKTPMYLAQENE 552

Query: 719 ASGLFAMRDEPRKDAAEGIKALKDMGISSLMLSGDNARTARAIGNKLGLEA-RGELLPQN 777
              + A+ D  + D+AE I  LK  GI  +ML+GDN  TA A+  K+G+E    E++PQ+
Sbjct: 553 LIAIIAVADPIKPDSAEAIARLKHSGIKVVMLTGDNQATAAAVAAKVGIETFFAEVMPQD 612

Query: 778 KVEEIRKLAEKKTVV-MVGDGINDAPALAAASVGVAIGSGTDVAMEAADAALMRNNVGDA 836
           K  ++ +L ++  VV M GDGINDAPALA A+VG AIG+GTDVA+E+AD  LMR ++   
Sbjct: 613 KASKVAELQQEGEVVGMTGDGINDAPALALANVGFAIGTGTDVAIESADITLMRGSLHGL 672

Query: 837 ARLIGLSRATMSNIRQN-----------VTIALG-LKAVFLVTTVTGVSGLWLAVFADTG 884
           A  I +S+AT+ NI+QN           + IA G L  +F +     ++G   A  A + 
Sbjct: 673 ADAIAVSKATLRNIKQNLFGAFVYNAAGIPIAAGILYPMFGLLLNPVIAG---AAMAFSS 729

Query: 885 ATVLVTANAMRL 896
            TV+  AN +RL
Sbjct: 730 LTVVSNANRLRL 741



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 117 NALIFSVGGMDCGSCAAKIETALSRLPGVGDVKVSVARERLNLS 160
           N +  ++ G  C SC  KIE AL+ +PGV   +++ A   + +S
Sbjct: 4   NRVQLNIIGAGCASCVGKIEKALNSVPGVDSAEMNFAERIVEVS 47



 Score = 33.1 bits (74), Expect = 7e-05
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 12 ESEELTFKVGGMDCGSCAAKIETALSRLPGVADVKVSVARERLNLS 57
          ++  +   + G  C SC  KIE AL+ +PGV   +++ A   + +S
Sbjct: 2  DTNRVQLNIIGAGCASCVGKIEKALNSVPGVDSAEMNFAERIVEVS 47