Pairwise Alignments

Query, 541 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

 Score =  100 bits (249), Expect = 1e-25
 Identities = 91/316 (28%), Positives = 142/316 (44%), Gaps = 36/316 (11%)

Query: 228 EWKWDGIRVQLSRAGETRKLYSRSGDDISGAFPDVLDAIEFEGVMDGELLVGGTAR---S 284
           E K+DG RVQ+ ++    K+YSR  ++I+ + P++++ I+   + D  +L G        
Sbjct: 250 ETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEIKKLDI-DNIILEGECVAMDLD 308

Query: 285 NNLTRTFSDLQQRLNRKTVTAKMRDDYPAFIRAYDLLFEGESDIRAQTYLERR------- 337
           +   R F D+ +R  RK    KM +     I  +D+L+     I       R        
Sbjct: 309 SGKPRPFQDILRRFRRKYNIDKMAEKIALRIYFFDVLYYNRGLIDTPLKTRREILEKLFG 368

Query: 338 -NRLSDIIERAPHDRFDLSPLIGFSSWSELDTLRAAPPDPVIE-----------GVMIKR 385
            N     +E+   + F    L  FSS+     L +  P+ V E           G+MIK 
Sbjct: 369 TNNWDSELEKIKKEIFSSKML--FSSFK----LNSGDPNLVKEFFNWSLSIGHEGIMIKN 422

Query: 386 RDSTYQAGRAKGPWFKWKRDPYNIDAVMMYAQRGHGKRSSYYSDFTFGVWAEGEDGEQLV 445
            D+ Y  G      +K K    N+D V+  A+ G GKR  +Y  +   V  +  DG  L 
Sbjct: 423 PDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMGKRKDWYGSYELSV--KDNDG-NLH 479

Query: 446 PVGKAYFGFTDAELEVLDKFVRDNTVERFGPVRAVRATPDFGFVLEVAFEGINRSTRHKS 505
            +G    G T+ +LE L K V +  +E  G    V   P    VLEV +E I  S +++ 
Sbjct: 480 VIGNVGSGLTEDDLEKLTKIVNEIKIEDLG--EEVILEPK--IVLEVTYEEIQTSEKYEM 535

Query: 506 GVAMRFPRIARLRADK 521
           G A+RFPR+ ++R DK
Sbjct: 536 GYALRFPRVVQIREDK 551